Literature DB >> 20452938

Protein subcellular localization in bacteria.

David Z Rudner1, Richard Losick.   

Abstract

Like their eukaryotic counterparts, bacterial cells have a highly organized internal architecture. Here, we address the question of how proteins localize to particular sites in the cell and how they do so in a dynamic manner. We consider the underlying mechanisms that govern the positioning of proteins and protein complexes in the examples of the divisome, polar assemblies, cytoplasmic clusters, cytoskeletal elements, and organelles. We argue that geometric cues, self-assembly, and restricted sites of assembly are all exploited by the cell to specifically localize particular proteins that we refer to as anchor proteins. These anchor proteins in turn govern the localization of a whole host of additional proteins. Looking ahead, we speculate on the existence of additional mechanisms that contribute to the organization of bacterial cells, such as the nucleoid, membrane microdomains enriched in specific lipids, and RNAs with positional information.

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Year:  2010        PMID: 20452938      PMCID: PMC2845201          DOI: 10.1101/cshperspect.a000307

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  92 in total

1.  Rapid pole-to-pole oscillation of a protein required for directing division to the middle of Escherichia coli.

Authors:  D M Raskin; P A de Boer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  Division site selection protein DivIVA of Bacillus subtilis has a second distinct function in chromosome segregation during sporulation.

Authors:  H B Thomaides; M Freeman; M El Karoui; J Errington
Journal:  Genes Dev       Date:  2001-07-01       Impact factor: 11.361

3.  Polar targeting of Shigella virulence factor IcsA in Enterobacteriacae and Vibrio.

Authors:  M Charles; M Pérez; J H Kobil; M B Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

4.  A feeding tube model for activation of a cell-specific transcription factor during sporulation in Bacillus subtilis.

Authors:  Amy H Camp; Richard Losick
Journal:  Genes Dev       Date:  2009-04-15       Impact factor: 11.361

5.  Self-organized periodicity of protein clusters in growing bacteria.

Authors:  Hui Wang; Ned S Wingreen; Ranjan Mukhopadhyay
Journal:  Phys Rev Lett       Date:  2008-11-20       Impact factor: 9.161

Review 6.  Super-resolution microscopy by nanoscale localization of photo-switchable fluorescent probes.

Authors:  Mark Bates; Bo Huang; Xiaowei Zhuang
Journal:  Curr Opin Chem Biol       Date:  2008-10       Impact factor: 8.822

Review 7.  Functions of lipid rafts in biological membranes.

Authors:  D A Brown; E London
Journal:  Annu Rev Cell Dev Biol       Date:  1998       Impact factor: 13.827

8.  Polar localization of the MinD protein of Bacillus subtilis and its role in selection of the mid-cell division site.

Authors:  A L Marston; H B Thomaides; D H Edwards; M E Sharpe; J Errington
Journal:  Genes Dev       Date:  1998-11-01       Impact factor: 11.361

9.  Bacillus subtilis MinC destabilizes FtsZ-rings at new cell poles and contributes to the timing of cell division.

Authors:  James A Gregory; Eric C Becker; Kit Pogliano
Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

10.  Geometric cue for protein localization in a bacterium.

Authors:  Kumaran S Ramamurthi; Sigolene Lecuyer; Howard A Stone; Richard Losick
Journal:  Science       Date:  2009-03-06       Impact factor: 47.728

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  83 in total

Review 1.  Regulation of the polarity of protein trafficking by phosphorylation.

Authors:  Anindya Ganguly; Daisuke Sasayama; Hyung-Taeg Cho
Journal:  Mol Cells       Date:  2012-03-26       Impact factor: 5.034

2.  A LytM domain dictates the localization of proteins to the mother cell-forespore interface during bacterial endospore formation.

Authors:  Jeffrey Meisner; Charles P Moran
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

Review 3.  Poles apart: prokaryotic polar organelles and their spatial regulation.

Authors:  Clare L Kirkpatrick; Patrick H Viollier
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-03-01       Impact factor: 10.005

4.  Quantitative Analysis of Intracellular Fluorescent Foci in Live Bacteria.

Authors:  M Charl Moolman; Jacob W J Kerssemakers; Nynke H Dekker
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

5.  Best practices for fluorescence microscopy of the cyanobacterial circadian clock.

Authors:  Susan E Cohen; Marcella L Erb; Joe Pogliano; Susan S Golden
Journal:  Methods Enzymol       Date:  2014-12-26       Impact factor: 1.600

Review 6.  How do bacteria localize proteins to the cell pole?

Authors:  Géraldine Laloux; Christine Jacobs-Wagner
Journal:  J Cell Sci       Date:  2013-12-17       Impact factor: 5.285

Review 7.  Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria.

Authors:  Benjamin D Rae; Benedict M Long; Murray R Badger; G Dean Price
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

8.  Genome characterization of a novel Burkholderia cepacia complex genomovar isolated from dieback affected mango orchards.

Authors:  Asifullah Khan; Huma Asif; David J Studholme; Ishtiaq A Khan; M Kamran Azim
Journal:  World J Microbiol Biotechnol       Date:  2013-05-08       Impact factor: 3.312

9.  The compartmentalized vessel: The bacterial cell as a model for subcellular organization (a tale of two studies).

Authors:  Orna Amster-Choder
Journal:  Cell Logist       Date:  2011-03

Review 10.  From water and ions to crowded biomacromolecules: in vivo structuring of a prokaryotic cell.

Authors:  Jan Spitzer
Journal:  Microbiol Mol Biol Rev       Date:  2011-09       Impact factor: 11.056

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