Literature DB >> 20451881

Genetic identification of Southern Ocean octopod samples using mtCOI.

Eivind Andreas Baste Undheim1, Janette Ann Norman, Hanne Halkinrud Thoen, Bryan Grieg Fry.   

Abstract

East Antarctic octopods were identified by sequencing mtCOI and using four analytical approaches: Neighbor-joining by Kimura-2-Parameter-based distances, character-based, BLAST, and Bayesian Inference of Phylogeny. Although the distance-based analytical approaches identified a high proportion of the sequences (99.5% to genus and 88.1% to species level), these results are undermined by the absence of a clear gap between intra- and interspecific variation. The character-based approach gave highly conflicting results compared to the distance-based methods and failed to identify apomorphic characters for many of the species. While a DNA independent approach is necessary for validation of the method comparisons, crude morphological observations give early support to the distance-based results and indicate extensive range expansions of several species compared to previous studies. Furthermore, the use of distance-based phylogenetic methods nevertheless group specimens into plausible species clades that are highly useful in non-taxonomical or non-systematic studies. Copyright 2010 Académie des sciences. Published by Elsevier SAS. All rights reserved.

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Year:  2010        PMID: 20451881     DOI: 10.1016/j.crvi.2010.02.002

Source DB:  PubMed          Journal:  C R Biol        ISSN: 1631-0691            Impact factor:   1.583


  4 in total

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Journal:  J Mol Evol       Date:  2013-03-02       Impact factor: 2.395

2.  New Data on the Systematics of Comb-fin Squids Chtenopteryx spp. (Cephalopoda: Chtenopterygidae) from the Canary Islands.

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Journal:  Zool Stud       Date:  2018-12-30       Impact factor: 2.058

3.  Allopatric speciation within a cryptic species complex of Australasian octopuses.

Authors:  Michael D Amor; Mark D Norman; Hayley E Cameron; Jan M Strugnell
Journal:  PLoS One       Date:  2014-06-25       Impact factor: 3.240

4.  A Real-Time PCR Method for the Authentication of Common Cuttlefish (Sepia officinalis) in Food Products.

Authors:  Amaya Velasco; Graciela Ramilo-Fernández; Carmen G Sotelo
Journal:  Foods       Date:  2020-03-04
  4 in total

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