Literature DB >> 20451172

A splice-site mutation in a retina-specific exon of BBS8 causes nonsyndromic retinitis pigmentosa.

S Amer Riazuddin1, Muhammad Iqbal, Yue Wang, Tomohiro Masuda, Yuhng Chen, Sara Bowne, Lori S Sullivan, Naushin H Waseem, Shomi Bhattacharya, Stephen P Daiger, Kang Zhang, Shaheen N Khan, Sheikh Riazuddin, J Fielding Hejtmancik, Paul A Sieving, Donald J Zack, Nicholas Katsanis.   

Abstract

Tissue-specific alternative splicing is an important mechanism for providing spatiotemporal protein diversity. Here we show that an in-frame splice mutation in BBS8, one of the genes involved in pleiotropic Bardet-Biedl syndrome (BBS), is sufficient to cause nonsyndromic retinitis pigmentosa (RP). A genome-wide scan of a consanguineous RP pedigree mapped the trait to a 5.6 Mb region; subsequent systematic sequencing of candidate transcripts identified a homozygous splice-site mutation in a previously unknown BBS8 exon. The allele segregated with the disorder, was absent from controls, was completely invariant across evolution, and was predicted to lead to the elimination of a 10 amino acid sequence from the protein. Subsequent studies showed the exon to be expressed exclusively in the retina and enriched significantly in the photoreceptor layer. Importantly, we found this exon to represent the major BBS8 mRNA species in the mammalian photoreceptor, suggesting that the encoded 10 amino acids play a pivotal role in the function of BBS8 in this organ. Understanding the role of this additional sequence might therefore inform the mechanism of retinal degeneration in patients with syndromic BBS or other related ciliopathies. Copyright (c) 2010 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20451172      PMCID: PMC2869005          DOI: 10.1016/j.ajhg.2010.04.001

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  16 in total

1.  A frame shift mutation in a tissue-specific alternatively spliced exon of collagen 2A1 in Wagner's vitreoretinal degeneration.

Authors:  Sanjoy K Gupta; Brian C Leonard; Karim F Damji; Dennis E Bulman
Journal:  Am J Ophthalmol       Date:  2002-02       Impact factor: 5.258

Review 2.  Retinitis pigmentosa.

Authors:  Dyonne T Hartong; Eliot L Berson; Thaddeus P Dryja
Journal:  Lancet       Date:  2006-11-18       Impact factor: 79.321

Review 3.  Perspective on genes and mutations causing retinitis pigmentosa.

Authors:  Stephen P Daiger; Sara J Bowne; Lori S Sullivan
Journal:  Arch Ophthalmol       Date:  2007-02

Review 4.  Mechanistic insights into Bardet-Biedl syndrome, a model ciliopathy.

Authors:  Norann A Zaghloul; Nicholas Katsanis
Journal:  J Clin Invest       Date:  2009-03-02       Impact factor: 14.808

5.  Mutations in the CEP290 (NPHP6) gene are a frequent cause of Leber congenital amaurosis.

Authors:  Anneke I den Hollander; Robert K Koenekoop; Suzanne Yzer; Irma Lopez; Maarten L Arends; Krysta E J Voesenek; Marijke N Zonneveld; Tim M Strom; Thomas Meitinger; Han G Brunner; Carel B Hoyng; L Ingeborgh van den Born; Klaus Rohrschneider; Frans P M Cremers
Journal:  Am J Hum Genet       Date:  2006-07-11       Impact factor: 11.025

Review 6.  Retinitis pigmentosa: genes, proteins and prospects.

Authors:  M M Hims; S P Diager; C F Inglehearn
Journal:  Dev Ophthalmol       Date:  2003

7.  Missense and nonsense mutations in the alternatively-spliced exon 2 of COL2A1 cause the ocular variant of Stickler syndrome.

Authors:  Audrey McAlinden; Marja Majava; Paul N Bishop; Rahat Perveen; Graeme C M Black; Mary Ella Pierpont; Leena Ala-Kokko; Minna Männikkö
Journal:  Hum Mutat       Date:  2008-01       Impact factor: 4.878

8.  Pleiotropic effects of CEP290 (NPHP6) mutations extend to Meckel syndrome.

Authors:  Lekbir Baala; Sophie Audollent; Jéléna Martinovic; Catherine Ozilou; Marie-Claude Babron; Sivanthiny Sivanandamoorthy; Sophie Saunier; Rémi Salomon; Marie Gonzales; Eleanor Rattenberry; Chantal Esculpavit; Annick Toutain; Claude Moraine; Philippe Parent; Pascale Marcorelles; Marie-Christine Dauge; Joëlle Roume; Martine Le Merrer; Vardiella Meiner; Karen Meir; Françoise Menez; Anne-Marie Beaufrère; Christine Francannet; Julia Tantau; Martine Sinico; Yves Dumez; Fiona MacDonald; Arnold Munnich; Stanislas Lyonnet; Marie-Claire Gubler; Emmanuelle Génin; Colin A Johnson; Michel Vekemans; Férechté Encha-Razavi; Tania Attié-Bitach
Journal:  Am J Hum Genet       Date:  2007-06-04       Impact factor: 11.025

9.  Hypomorphic mutations in syndromic encephalocele genes are associated with Bardet-Biedl syndrome.

Authors:  Carmen C Leitch; Norann A Zaghloul; Erica E Davis; Corinne Stoetzel; Anna Diaz-Font; Suzanne Rix; Majid Alfadhel; Majid Al-Fadhel; Richard Alan Lewis; Wafaa Eyaid; Eyal Banin; Helene Dollfus; Philip L Beales; Jose L Badano; Nicholas Katsanis
Journal:  Nat Genet       Date:  2008-03-09       Impact factor: 38.330

Review 10.  The ciliopathies: an emerging class of human genetic disorders.

Authors:  Jose L Badano; Norimasa Mitsuma; Phil L Beales; Nicholas Katsanis
Journal:  Annu Rev Genomics Hum Genet       Date:  2006       Impact factor: 8.929

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  56 in total

Review 1.  Structural and molecular bases of rod photoreceptor morphogenesis and disease.

Authors:  Theodore G Wensel; Zhixian Zhang; Ivan A Anastassov; Jared C Gilliam; Feng He; Michael F Schmid; Michael A Robichaux
Journal:  Prog Retin Eye Res       Date:  2016-06-22       Impact factor: 21.198

2.  Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM).

Authors:  Gregory R Grant; Michael H Farkas; Angel D Pizarro; Nicholas F Lahens; Jonathan Schug; Brian P Brunk; Christian J Stoeckert; John B Hogenesch; Eric A Pierce
Journal:  Bioinformatics       Date:  2011-07-19       Impact factor: 6.937

3.  A missense mutation in ASRGL1 is involved in causing autosomal recessive retinal degeneration.

Authors:  Pooja Biswas; Venkata Ramana Murthy Chavali; Giulia Agnello; Everett Stone; Christina Chakarova; Jacque L Duncan; Chitra Kannabiran; Melissa Homsher; Shomi S Bhattacharya; Muhammad Asif Naeem; Adva Kimchi; Dror Sharon; Takeshi Iwata; Shaikh Riazuddin; G Bhanuprakash Reddy; J Fielding Hejtmancik; George Georgiou; S Amer Riazuddin; Radha Ayyagari
Journal:  Hum Mol Genet       Date:  2016-04-22       Impact factor: 6.150

4.  Unraveling the mysteries of pre-mRNA splicing in the retina via stem cell technology.

Authors:  Rob W J Collin
Journal:  Stem Cell Investig       Date:  2016-11-04

Review 5.  Photoreceptor Cilia and Retinal Ciliopathies.

Authors:  Kinga M Bujakowska; Qin Liu; Eric A Pierce
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-10-03       Impact factor: 10.005

6.  Bardet-Biedl syndrome-8 (BBS8) protein is crucial for the development of outer segments in photoreceptor neurons.

Authors:  Tanya L Dilan; Ratnesh K Singh; Thamaraiselvi Saravanan; Abigail Moye; Andrew F X Goldberg; Peter Stoilov; Visvanathan Ramamurthy
Journal:  Hum Mol Genet       Date:  2018-01-15       Impact factor: 6.150

7.  Loss of Bardet-Biedl syndrome protein-8 (BBS8) perturbs olfactory function, protein localization, and axon targeting.

Authors:  Abigail L D Tadenev; Heather M Kulaga; Helen L May-Simera; Matthew W Kelley; Nicholas Katsanis; Randall R Reed
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-06       Impact factor: 11.205

Review 8.  Genetic characterization and disease mechanism of retinitis pigmentosa; current scenario.

Authors:  Muhammad Umar Ali; Muhammad Saif Ur Rahman; Jiang Cao; Ping Xi Yuan
Journal:  3 Biotech       Date:  2017-07-18       Impact factor: 2.406

Review 9.  Genomic approaches for the discovery of genes mutated in inherited retinal degeneration.

Authors:  Anna M Siemiatkowska; Rob W J Collin; Anneke I den Hollander; Frans P M Cremers
Journal:  Cold Spring Harb Perspect Med       Date:  2014-06-17       Impact factor: 6.915

10.  Mutations of 60 known causative genes in 157 families with retinitis pigmentosa based on exome sequencing.

Authors:  Yan Xu; Liping Guan; Tao Shen; Jianguo Zhang; Xueshan Xiao; Hui Jiang; Shiqiang Li; Jianhua Yang; Xiaoyun Jia; Ye Yin; Xiangming Guo; Jun Wang; Qingjiong Zhang
Journal:  Hum Genet       Date:  2014-06-18       Impact factor: 4.132

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