Literature DB >> 20450881

Purification and characterization of Put1p from Saccharomyces cerevisiae.

Srimevan Wanduragala1, Nikhilesh Sanyal, Xinwen Liang, Donald F Becker.   

Abstract

In Saccharomyces cerevisiae, the PUT1 and PUT2 genes are required for the conversion of proline to glutamate. The PUT1 gene encodes Put1p, a proline dehydrogenase (PRODH) enzyme localized in the mitochondrion. Put1p was expressed and purified from Escherichia coli and shown to have a UV-visible absorption spectrum that is typical of a bound flavin cofactor. A K(m) value of 36 mM proline and a k(cat)=27 s(-1) were determined for Put1p using an artificial electron acceptor. Put1p also exhibited high activity using ubiquinone-1 (CoQ(1)) as an electron acceptor with a k(cat)=9.6 s(-1) and a K(m) of 33 microM for CoQ(1). In addition, knockout strains of the electron transfer flavoprotein (ETF) homolog in S. cerevisiae were able to grow on proline as the sole nitrogen source demonstrating that ETF is not required for proline utilization in yeast. Copyright (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20450881      PMCID: PMC2880193          DOI: 10.1016/j.abb.2010.04.020

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  39 in total

1.  Effects of proline analog binding on the spectroscopic and redox properties of PutA.

Authors:  Weidong Zhu; Yekaterina Gincherman; Paul Docherty; Christopher D Spilling; Donald F Becker
Journal:  Arch Biochem Biophys       Date:  2002-12-01       Impact factor: 4.013

2.  The reactivity of flavoproteins with sulfite. Possible relevance to the problem of oxygen reactivity.

Authors:  V Massey; F Müller; R Feldberg; M Schuman; P A Sullivan; L G Howell; S G Mayhew; R G Matthews; G P Foust
Journal:  J Biol Chem       Date:  1969-08-10       Impact factor: 5.157

3.  Redox properties of the PutA protein from Escherichia coli and the influence of the flavin redox state on PutA-DNA interactions.

Authors:  D F Becker; E A Thomas
Journal:  Biochemistry       Date:  2001-04-17       Impact factor: 3.162

4.  Glutaric aciduria type II: report on a previously undescribed metabolic disorder.

Authors:  H Przyrembel; U Wendel; K Becker; H J Bremer; L Bruinvis; D Ketting; S K Wadman
Journal:  Clin Chim Acta       Date:  1976-01-16       Impact factor: 3.786

5.  Modulation of transcription factor function by an amino acid: activation of Put3p by proline.

Authors:  Christopher A Sellick; Richard J Reece
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

6.  Structures of the Escherichia coli PutA proline dehydrogenase domain in complex with competitive inhibitors.

Authors:  Min Zhang; Tommi A White; Jonathan P Schuermann; Berevan A Baban; Donald F Becker; John J Tanner
Journal:  Biochemistry       Date:  2004-10-05       Impact factor: 3.162

7.  Bacteroid proline catabolism affects N(2) fixation rate of drought-stressed soybeans.

Authors:  Jason Curtis; Georgia Shearer; Daniel H Kohl
Journal:  Plant Physiol       Date:  2004-09-24       Impact factor: 8.340

8.  Mechanism of the electron transfer catalyst DsbB from Escherichia coli.

Authors:  Ulla Grauschopf; Andrea Fritz; Rudi Glockshuber
Journal:  EMBO J       Date:  2003-07-15       Impact factor: 11.598

9.  Mutation of a phosphorylatable residue in Put3p affects the magnitude of rapamycin-induced PUT1 activation in a Gat1p-dependent manner.

Authors:  Michael K Leverentz; Robert N Campbell; Yvonne Connolly; Anthony D Whetton; Richard J Reece
Journal:  J Biol Chem       Date:  2009-07-01       Impact factor: 5.157

10.  Structure of the proline dehydrogenase domain of the multifunctional PutA flavoprotein.

Authors:  Yong-Hwan Lee; Shorena Nadaraia; Dan Gu; Donald F Becker; John J Tanner
Journal:  Nat Struct Biol       Date:  2003-02
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  22 in total

Review 1.  Structure, function, and mechanism of proline utilization A (PutA).

Authors:  Li-Kai Liu; Donald F Becker; John J Tanner
Journal:  Arch Biochem Biophys       Date:  2017-07-14       Impact factor: 4.013

2.  Evidence for Pipecolate Oxidase in Mediating Protection Against Hydrogen Peroxide Stress.

Authors:  Sathish Kumar Natarajan; Ezhumalai Muthukrishnan; Oleh Khalimonchuk; Justin L Mott; Donald F Becker
Journal:  J Cell Biochem       Date:  2016-12-13       Impact factor: 4.429

3.  Hyperprolinemia in Type 2 Glutaric Aciduria and MADD-Like Profiles.

Authors:  Clément Pontoizeau; Florence Habarou; Anaïs Brassier; Alice Veauville-Merllié; Coraline Grisel; Jean-Baptiste Arnoux; Christine Vianey-Saban; Robert Barouki; Bernadette Chadefaux-Vekemans; Cécile Acquaviva; Pascale de Lonlay; Chris Ottolenghi
Journal:  JIMD Rep       Date:  2015-09-27

4.  L-Proline uptake in Saccharomyces cerevisiae mitochondria can contribute to bioenergetics during nutrient stress as alternative mitochondrial fuel.

Authors:  Maria Luigia Pallotta
Journal:  World J Microbiol Biotechnol       Date:  2013-07-04       Impact factor: 3.312

5.  Discovery of the Membrane Binding Domain in Trifunctional Proline Utilization A.

Authors:  Shelbi L Christgen; Weidong Zhu; Nikhilesh Sanyal; Bushra Bibi; John J Tanner; Donald F Becker
Journal:  Biochemistry       Date:  2017-11-15       Impact factor: 3.162

6.  Proline dehydrogenase 2 (PRODH2) is a hydroxyproline dehydrogenase (HYPDH) and molecular target for treating primary hyperoxaluria.

Authors:  Candice B Summitt; Lynnette C Johnson; Thomas J Jönsson; Derek Parsonage; Ross P Holmes; W Todd Lowther
Journal:  Biochem J       Date:  2015-03-01       Impact factor: 3.857

Review 7.  Proline mechanisms of stress survival.

Authors:  Xinwen Liang; Lu Zhang; Sathish Kumar Natarajan; Donald F Becker
Journal:  Antioxid Redox Signal       Date:  2013-05-23       Impact factor: 8.401

Review 8.  Structural Biology of Proline Catabolic Enzymes.

Authors:  John J Tanner
Journal:  Antioxid Redox Signal       Date:  2017-11-13       Impact factor: 8.401

Review 9.  Role of Proline in Pathogen and Host Interactions.

Authors:  Shelbi L Christgen; Donald F Becker
Journal:  Antioxid Redox Signal       Date:  2018-02-02       Impact factor: 8.401

10.  Differential contribution of the proline and glutamine pathways to glutamate biosynthesis and nitrogen assimilation in yeast lacking glutamate dehydrogenase.

Authors:  Alex G Sieg; Pamela J Trotter
Journal:  Microbiol Res       Date:  2014-02-17       Impact factor: 5.415

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