Literature DB >> 20446871

Adsorption of nucleic acid components on rutile (TiO(2)) surfaces.

H James Cleaves1, Caroline M Jonsson, Christopher L Jonsson, Dimitri A Sverjensky, Robert M Hazen.   

Abstract

Nucleic acids, the storage molecules of genetic information, are composed of repeating polymers of ribonucleotides (in RNA) or deoxyribonucleotides (in DNA), which are themselves composed of a phosphate moiety, a sugar moiety, and a nitrogenous base. The interactions between these components and mineral surfaces are important because there is a tremendous flux of nucleic acids in the environment due to cell death and horizontal gene transfer. The adsorption of mono-, oligo-, and polynucleotides and their components on mineral surfaces may have been important for the origin of life. We have studied here interactions of nucleic acid components with rutile (TiO(2)), a mineral common in many terrestrial crustal rocks. Our results suggest roles for several nucleic acid functional groups (including sugar hydroxyl groups, the phosphate group, and extracyclic functional groups on the bases) in binding, in agreement with results obtained from studies of other minerals. In contrast with recent studies of nucleotide adsorption on ZnO, aluminum oxides, and hematite, our results suggest a different preferred orientation for the monomers on rutile surfaces. The conformations of the molecules bound to rutile surfaces appear to favor specific interactions, which in turn may allow identification of the most favorable mineral surfaces for nucleic acid adsorption.

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Year:  2010        PMID: 20446871     DOI: 10.1089/ast.2009.0397

Source DB:  PubMed          Journal:  Astrobiology        ISSN: 1557-8070            Impact factor:   4.335


  10 in total

Review 1.  Mineral surfaces, geochemical complexities, and the origins of life.

Authors:  Robert M Hazen; Dimitri A Sverjensky
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04-14       Impact factor: 10.005

2.  Adsorption of adenine and thymine on zeolites: FT-IR and EPR spectroscopy and X-ray diffractometry and SEM studies.

Authors:  João Paulo T Baú; Cristine E A Carneiro; Ivan G de Souza Junior; Cláudio M D de Souza; Antonio C S da Costa; Eduardo di Mauro; Cássia T B V Zaia; Joaquin Coronas; Clara Casado; Henrique de Santana; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2011-10-20       Impact factor: 1.950

3.  Surface interaction of L-alanine on hematite: an astrobiological implication.

Authors:  Pramod Pandey; Chandra Kala Pant; Kavita Gururani; Priyanka Arora; Sumit Kumar; Yogesh Sharma; Hari Datt Pathak; Mohan Singh Mehata
Journal:  Orig Life Evol Biosph       Date:  2014-01-09       Impact factor: 1.950

4.  A Prebiotic Chemistry Experiment on the Adsorption of Nucleic Acids Bases onto a Natural Zeolite.

Authors:  Pedro R Anizelli; João Paulo T Baú; Frederico P Gomes; Antonio Carlos S da Costa; Cristine E A Carneiro; Cássia Thaïs B V Zaia; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2015-03-10       Impact factor: 1.950

5.  Chance, necessity and the origins of life: a physical sciences perspective.

Authors:  Robert M Hazen
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-12-28       Impact factor: 4.226

6.  Adsorption of adenine, cytosine, thymine, and uracil on sulfide-modified montmorillonite: FT-IR, Mössbauer and EPR spectroscopy and X-ray diffractometry studies.

Authors:  Cristine E A Carneiro; Graciele Berndt; Ivan G de Souza Junior; Cláudio M D de Souza; Andrea Paesano; Antonio C S da Costa; Eduardo di Mauro; Henrique de Santana; Cássia T B V Zaia; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2011-06-30       Impact factor: 1.950

7.  Mechanistic aspects of photooxidation of polyhydroxylated molecules on metal oxides.

Authors:  Ilya A Shkrob; Timothy M Marin; Sergey D Chemerisov; Michael D Sevilla
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2011-03-24       Impact factor: 4.126

8.  Photooxidation of nucleic acids on metal oxides: physico-chemical and astrobiological perspectives.

Authors:  Ilya A Shkrob; Timothy M Marin; Amitava Adhikary; Michael D Sevilla
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2011-02-07       Impact factor: 4.126

9.  The guanidine thiocyanate-high EDTA method for total microbial RNA extraction from severely heavy metal-contaminated soils.

Authors:  Yaxin Pei; Tursunay Mamtimin; Jing Ji; Aman Khan; Apurva Kakade; Tuoyu Zhou; Zhengsheng Yu; Hajira Zain; Wenzhi Yang; Zhenmin Ling; Wenya Zhang; Yingmei Zhang; Xiangkai Li
Journal:  Microb Biotechnol       Date:  2020-06-23       Impact factor: 5.813

Review 10.  Extraction of bacterial RNA from soil: challenges and solutions.

Authors:  Yong Wang; Masahito Hayatsu; Takeshi Fujii
Journal:  Microbes Environ       Date:  2012       Impact factor: 2.912

  10 in total

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