Literature DB >> 20445897

Role of excited-state hydrogen detachment and hydrogen-transfer processes for the excited-state deactivation of an aromatic dipeptide: N-acetyl tryptophan methyl amide.

Dorit Shemesh1, Andrzej L Sobolewski, Wolfgang Domcke.   

Abstract

The excited-state electronic potential-energy surfaces of the three conformers of the capped dipeptide N-acetyl tryptophan methyl amide (NATMA), for which UV and IR spectra have been reported by Dian et al. [J. Chem. Phys., 2003, 118, 2696], have been explored with ab initio electronic-structure methods. The results provide insight into the nonadiabatic electronic coupling mechanisms which are responsible for the pronounced and conformer-specific perturbations of the spectra, such as broad and congested UV spectra as well as the deletion of certain fundamentals in the IR spectrum of the S(1) state. It is shown that the photophysical dynamics of NATMA is governed by at least five excited singlet electronic states: the two spectroscopic (1)L(b) and (1)L(a) states and the dissociative (1)pisigma* state of the indole chromophore, as well as a locally-excited state and a charge-transfer state of the peptide backbone. For the conformer NATMA C, which exhibits a gamma-turn of the backbone, a potentially very efficient excited-state deactivation mechanism to the electronic ground state via three conical intersections has been revealed. The results confirm the important role of hydrogen bonds for rapid excited-state deactivation of peptides, which enhances their photostability.

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Year:  2010        PMID: 20445897     DOI: 10.1039/b927024h

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  5 in total

1.  Peptide deactivation: Spectroscopy meets theory.

Authors:  Wolfgang Domcke; Andrzej L Sobolewski
Journal:  Nat Chem       Date:  2013-04       Impact factor: 24.427

2.  Comprehensive conformational studies of five tripeptides and a deduced method for efficient determinations of peptide structures.

Authors:  Wenbo Yu; Zhiqing Wu; Huibin Chen; Xu Liu; Alexander D MacKerell; Zijing Lin
Journal:  J Phys Chem B       Date:  2012-02-10       Impact factor: 2.991

3.  Relating Trp-Glu dipeptide fluorescence to molecular conformation: the role of the discrete Chi 1 and Chi 2 angles.

Authors:  Azaria Solomon Eisenberg; Laura J Juszczak
Journal:  J Comput Chem       Date:  2013-04-08       Impact factor: 3.376

4.  The broken ring: reduced aromaticity in Lys-Trp cations and high pH tautomer correlates with lower quantum yield and shorter lifetimes.

Authors:  Azaria Solomon Eisenberg; Laura J Juszczak
Journal:  J Phys Chem B       Date:  2014-06-17       Impact factor: 2.991

5.  First-principles data set of 45,892 isolated and cation-coordinated conformers of 20 proteinogenic amino acids.

Authors:  Matti Ropo; Markus Schneider; Carsten Baldauf; Volker Blum
Journal:  Sci Data       Date:  2016-02-16       Impact factor: 6.444

  5 in total

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