Literature DB >> 20445087

Colloquium paper: uniquely human evolution of sialic acid genetics and biology.

Ajit Varki1.   

Abstract

Darwinian evolution of humans from our common ancestors with nonhuman primates involved many gene-environment interactions at the population level, and the resulting human-specific genetic changes must contribute to the "Human Condition." Recent data indicate that the biology of sialic acids (which directly involves less than 60 genes) shows more than 10 uniquely human genetic changes in comparison with our closest evolutionary relatives. Known outcomes are tissue-specific changes in abundant cell-surface glycans, changes in specificity and/or expression of multiple proteins that recognize these glycans, and novel pathogen regimes. Specific events include Alu-mediated inactivation of the CMAH gene, resulting in loss of synthesis of the Sia N-glycolylneuraminic acid (Neu5Gc) and increase in expression of the precursor N-acetylneuraminic acid (Neu5Ac); increased expression of alpha2-6-linked Sias (likely because of changed expression of ST6GALI); and multiple changes in SIGLEC genes encoding Sia-recognizing Ig-like lectins (Siglecs). The last includes binding specificity changes (in Siglecs -5, -7, -9, -11, and -12); expression pattern changes (in Siglecs -1, -5, -6, and -11); gene conversion (SIGLEC11); and deletion or pseudogenization (SIGLEC13, SIGLEC14, and SIGLEC16). A nongenetic outcome of the CMAH mutation is human metabolic incorporation of foreign dietary Neu5Gc, in the face of circulating anti-Neu5Gc antibodies, generating a novel "xeno-auto-antigen" situation. Taken together, these data suggest that both the genes associated with Sia biology and the related impacts of the environment comprise a relative "hot spot" of genetic and physiological changes in human evolution, with implications for uniquely human features both in health and disease.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20445087      PMCID: PMC3024026          DOI: 10.1073/pnas.0914634107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  96 in total

Review 1.  Siglecs--the major subfamily of I-type lectins.

Authors:  Ajit Varki; Takashi Angata
Journal:  Glycobiology       Date:  2005-07-13       Impact factor: 4.313

2.  Cloning and characterization of human Siglec-11. A recently evolved signaling molecule that can interact with SHP-1 and SHP-2 and is expressed by tissue macrophages, including brain microglia.

Authors:  Takashi Angata; Sheena C Kerr; David R Greaves; Nissi M Varki; Paul R Crocker; Ajit Varki
Journal:  J Biol Chem       Date:  2002-05-01       Impact factor: 5.157

3.  Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene.

Authors:  T Hayakawa; Y Satta; P Gagneux; A Varki; N Takahata
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-18       Impact factor: 11.205

4.  Mechanism of uptake and incorporation of the non-human sialic acid N-glycolylneuraminic acid into human cells.

Authors:  Muriel Bardor; Dzung H Nguyen; Sandra Diaz; Ajit Varki
Journal:  J Biol Chem       Date:  2004-11-22       Impact factor: 5.157

5.  Red meat and chicken consumption and its association with age-related macular degeneration.

Authors:  Elaine W-T Chong; Julie A Simpson; Luibov D Robman; Allison M Hodge; Khin Zaw Aung; Dallas R English; Graham G Giles; Robyn H Guymer
Journal:  Am J Epidemiol       Date:  2009-02-20       Impact factor: 4.897

6.  Sialic acid-binding Ig-like lectin 1 expression in inflammatory and resident monocytes is a potential biomarker for monitoring disease activity and success of therapy in systemic lupus erythematosus.

Authors:  Robert Biesen; Cemal Demir; Fidan Barkhudarova; Joachim R Grün; Marta Steinbrich-Zöllner; Marina Backhaus; Thomas Häupl; Martin Rudwaleit; Gabriela Riemekasten; Andreas Radbruch; Falk Hiepe; Gerd-Rüdiger Burmester; Andreas Grützkau
Journal:  Arthritis Rheum       Date:  2008-04

7.  Human-specific regulation of alpha 2-6-linked sialic acids.

Authors:  Pascal Gagneux; Monica Cheriyan; Nancy Hurtado-Ziola; Els C M Brinkman van der Linden; Dan Anderson; Harold McClure; Ajit Varki; Nissi M Varki
Journal:  J Biol Chem       Date:  2003-09-18       Impact factor: 5.157

8.  Escherichia coli K99 binds to N-glycolylsialoparagloboside and N-glycolyl-GM3 found in piglet small intestine.

Authors:  M Kyogashima; V Ginsburg; H C Krivan
Journal:  Arch Biochem Biophys       Date:  1989-04       Impact factor: 4.013

9.  Molecular mimicry of host sialylated glycans allows a bacterial pathogen to engage neutrophil Siglec-9 and dampen the innate immune response.

Authors:  Aaron F Carlin; Satoshi Uchiyama; Yung-Chi Chang; Amanda L Lewis; Victor Nizet; Ajit Varki
Journal:  Blood       Date:  2009-02-04       Impact factor: 22.113

10.  Heart disease is common in humans and chimpanzees, but is caused by different pathological processes.

Authors:  Nissi Varki; Dan Anderson; James G Herndon; Tho Pham; Christopher J Gregg; Monica Cheriyan; James Murphy; Elizabeth Strobert; Jo Fritz; James G Else; Ajit Varki
Journal:  Evol Appl       Date:  2009-02       Impact factor: 5.183

View more
  119 in total

1.  Specific inactivation of two immunomodulatory SIGLEC genes during human evolution.

Authors:  Xiaoxia Wang; Nivedita Mitra; Ismael Secundino; Kalyan Banda; Pedro Cruz; Vered Padler-Karavani; Andrea Verhagen; Chris Reid; Martina Lari; Ermanno Rizzi; Carlotta Balsamo; Giorgio Corti; Gianluca De Bellis; Laura Longo; William Beggs; David Caramelli; Sarah A Tishkoff; Toshiyuki Hayakawa; Eric D Green; James C Mullikin; Victor Nizet; Jack Bui; Ajit Varki
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-04       Impact factor: 11.205

2.  Species-specific exon loss in human transcriptomes.

Authors:  Jinkai Wang; Zhi-xiang Lu; Collin J Tokheim; Sara E Miller; Yi Xing
Journal:  Mol Biol Evol       Date:  2014-11-14       Impact factor: 16.240

3.  Sialylation of lipooligosaccharides is dispensable for the virulence of Haemophilus ducreyi in humans.

Authors:  Stanley M Spinola; Wei Li; Kate R Fortney; Diane M Janowicz; Beth Zwickl; Barry P Katz; Robert S Munson
Journal:  Infect Immun       Date:  2011-12-05       Impact factor: 3.441

Review 4.  Multifarious roles of sialic acids in immunity.

Authors:  Ajit Varki; Pascal Gagneux
Journal:  Ann N Y Acad Sci       Date:  2012-04       Impact factor: 5.691

5.  Molecular phylogeny and functional genomics of beta-galactoside alpha2,6-sialyltransferases that explain ubiquitous expression of st6gal1 gene in amniotes.

Authors:  Daniel Petit; Anne-Marie Mir; Jean-Michel Petit; Christine Thisse; Philippe Delannoy; Rafael Oriol; Bernard Thisse; Anne Harduin-Lepers
Journal:  J Biol Chem       Date:  2010-09-20       Impact factor: 5.157

6.  Colloquium paper: in the light of evolution IV: the human condition.

Authors:  John C Avise; Francisco J Ayala
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-11       Impact factor: 11.205

7.  Transposable element insertions have strongly affected human evolution.

Authors:  Roy J Britten
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

Review 8.  Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates.

Authors:  Ian A Warren; Magali Naville; Domitille Chalopin; Perrine Levin; Chloé Suzanne Berger; Delphine Galiana; Jean-Nicolas Volff
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 9.  The tumour glyco-code as a novel immune checkpoint for immunotherapy.

Authors:  Ernesto RodrÍguez; Sjoerd T T Schetters; Yvette van Kooyk
Journal:  Nat Rev Immunol       Date:  2018-02-05       Impact factor: 53.106

Review 10.  Glycan evolution in response to collaboration, conflict, and constraint.

Authors:  Stevan A Springer; Pascal Gagneux
Journal:  J Biol Chem       Date:  2013-01-17       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.