Literature DB >> 20436937

Higher-Rank Correlation NMR Spectra with Spectral Moment Filtering.

Kerem Bingol1, Roberto K Salinas, Rafael Brüschweiler.   

Abstract

Higher-rank correlation spectroscopy is introduced as an alternative to 3D Fourier-transform (FT) NMR spectroscopy for resonance assignment and molecular structure determination. The method combines standard 2D FT spectra that share a common frequency dimension, such as a 2D (13)C-(1)H HSQC and a 2D (1)H-(1)H TOCSY spectrum, and constructs higher-rank correlation spectra with ultra-high spectral resolution. Spectral overlap along a common dimension, in particular the (1)H dimension, is addressed by a spectral filtering method, which identifies mismatches between the 1(st) and 2(nd) moments of cross-peak profiles. The method, which provides a substantial speed-up over traditional 3D FT spectroscopy while effectively suppressing false peaks, is demonstrated for the triple-rank (13)C-(1)H HSQC-TOCSY spectrum of a cyclic decapeptide with different mixing times. Higher-rank correlation spectroscopy is usefully applicable to the analysis of a wide range of NMR spectra of synthetic and natural products.

Entities:  

Year:  2010        PMID: 20436937      PMCID: PMC2860149          DOI: 10.1021/jz100264g

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  8 in total

1.  Covariance nuclear magnetic resonance spectroscopy.

Authors:  Rafael Brüschweiler; Fengli Zhang
Journal:  J Chem Phys       Date:  2004-03-15       Impact factor: 3.488

2.  Hyperdimensional NMR spectroscopy.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Am Chem Soc       Date:  2006-05-10       Impact factor: 15.419

3.  Natural-abundance 15N--13C correlation spectra of vitamin B-12.

Authors:  Eriks Kupce; Ray Freeman
Journal:  Magn Reson Chem       Date:  2007-02       Impact factor: 2.447

4.  Protein assignments without peak lists using higher-order spectra.

Authors:  Gregory Benison; Donald S Berkholz; Elisar Barbar
Journal:  J Magn Reson       Date:  2007-09-20       Impact factor: 2.229

Review 5.  Recent advances in solution NMR: fast methods and heteronuclear direct detection.

Authors:  Isabella C Felli; Bernhard Brutscher
Journal:  Chemphyschem       Date:  2009-07-13       Impact factor: 3.102

6.  Z-matrix formalism for quantitative noise assessment of covariance nuclear magnetic resonance spectra.

Authors:  David A Snyder; Arindam Ghosh; Fengli Zhang; Thomas Szyperski; Rafael Brüschweiler
Journal:  J Chem Phys       Date:  2008-09-14       Impact factor: 3.488

7.  Hyperdimensional protein NMR spectroscopy in peptide-sequence space.

Authors:  Ewen Lescop; Bernhard Brutscher
Journal:  J Am Chem Soc       Date:  2007-09-11       Impact factor: 15.419

8.  Indirect covariance NMR spectroscopy.

Authors:  Fengli Zhang; Rafael Brüschweiler
Journal:  J Am Chem Soc       Date:  2004-10-20       Impact factor: 15.419

  8 in total
  7 in total

Review 1.  Emerging new strategies for successful metabolite identification in metabolomics.

Authors:  Kerem Bingol; Lei Bruschweiler-Li; Dawei Li; Bo Zhang; Mouzhe Xie; Rafael Brüschweiler
Journal:  Bioanalysis       Date:  2016-02-26       Impact factor: 2.681

2.  Deconvolution of chemical mixtures with high complexity by NMR consensus trace clustering.

Authors:  Kerem Bingol; Rafael Brüschweiler
Journal:  Anal Chem       Date:  2011-08-30       Impact factor: 6.986

3.  Simultaneous de novo identification of molecules in chemical mixtures by doubly indirect covariance NMR spectroscopy.

Authors:  Fengli Zhang; Lei Bruschweiler-Li; Rafael Brüschweiler
Journal:  J Am Chem Soc       Date:  2010-11-09       Impact factor: 15.419

Review 4.  Multidimensional approaches to NMR-based metabolomics.

Authors:  Kerem Bingol; Rafael Brüschweiler
Journal:  Anal Chem       Date:  2013-11-22       Impact factor: 6.986

5.  NMR in metabolomics and natural products research: two sides of the same coin.

Authors:  Steven L Robinette; Rafael Brüschweiler; Frank C Schroeder; Arthur S Edison
Journal:  Acc Chem Res       Date:  2011-09-02       Impact factor: 22.384

6.  Identification of metabolites from 2D (1)H-(13)C HSQC NMR using peak correlation plots.

Authors:  Tommy Öman; May-Britt Tessem; Tone F Bathen; Helena Bertilsson; Anders Angelsen; Mattias Hedenström; Trygve Andreassen
Journal:  BMC Bioinformatics       Date:  2014-12-16       Impact factor: 3.169

7.  Facilitated assignment of large protein NMR signals with covariance sequential spectra using spectral derivatives.

Authors:  Bradley J Harden; Scott R Nichols; Dominique P Frueh
Journal:  J Am Chem Soc       Date:  2014-09-16       Impact factor: 15.419

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.