Literature DB >> 2043619

Yeast nucleosomal particles: structural and transcriptional properties.

M Piñeiro1, C Puerta, E Palacián.   

Abstract

Yeast nucleosomal core particles have been characterized by thermal denaturation, circular dichroism, and digestion with DNase I and with trypsin. Practically all nucleosomal DNA melts in one transition centered at 70 degrees C, and the circular dichroism spectrum is displaced to lower wavelengths as compared to that corresponding to chicken nucleosomal cores. The susceptibility of yeast nucleosomal particles to dissociation by salt is significantly higher than that of chicken nucleosomal cores, a substantial dissociation being observed at 0.5 M NaCl. Treatment of yeast nucleosomal particles with the amino group reagent dimethylmaleic anhydride is accompanied by selective release of histones H2A and H2B. The results indicate not large but significant structural differences between yeast and chicken nucleosomal cores. However, the in vitro transcription properties of complete and H2A.H2B-deficient nucleosomal cores are similar in the two kinds of particles: the histone octamer blocks RNA synthesis, this block being eliminated in part by the partial loss of histones H2A and H2B.

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Year:  1991        PMID: 2043619     DOI: 10.1021/bi00237a025

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

Review 1.  Histone H2B ubiquitination and beyond: Regulation of nucleosome stability, chromatin dynamics and the trans-histone H3 methylation.

Authors:  Mahesh B Chandrasekharan; Fu Huang; Zu-Wen Sun
Journal:  Epigenetics       Date:  2010-08-16       Impact factor: 4.528

2.  Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

Authors:  Chunyuan Jin; Gary Felsenfeld
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

3.  Histone H2B C-terminal helix mediates trans-histone H3K4 methylation independent of H2B ubiquitination.

Authors:  Mahesh B Chandrasekharan; Fu Huang; Yi-Chun Chen; Zu-Wen Sun
Journal:  Mol Cell Biol       Date:  2010-05-03       Impact factor: 4.272

4.  Phosphorylation of histone H2A.X by DNA-dependent protein kinase is not affected by core histone acetylation, but it alters nucleosome stability and histone H1 binding.

Authors:  Andra Li; Yaping Yu; Sheng-Chun Lee; Toyotaka Ishibashi; Susan P Lees-Miller; Juan Ausió
Journal:  J Biol Chem       Date:  2010-03-31       Impact factor: 5.157

5.  Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions.

Authors:  C L White; R K Suto; K Luger
Journal:  EMBO J       Date:  2001-09-17       Impact factor: 11.598

Review 6.  Decoding the trans-histone crosstalk: methods to analyze H2B ubiquitination, H3 methylation and their regulatory factors.

Authors:  Mahesh B Chandrasekharan; Fu Huang; Zu-Wen Sun
Journal:  Methods       Date:  2011-03-08       Impact factor: 3.608

7.  INO80 Chromatin Remodeler Facilitates Release of RNA Polymerase II from Chromatin for Ubiquitin-Mediated Proteasomal Degradation.

Authors:  Anne Lafon; Surayya Taranum; Federico Pietrocola; Florent Dingli; Damarys Loew; Sandipan Brahma; Blaine Bartholomew; Manolis Papamichos-Chronakis
Journal:  Mol Cell       Date:  2015-11-19       Impact factor: 17.970

8.  Ubiquitination of histone H2B regulates chromatin dynamics by enhancing nucleosome stability.

Authors:  Mahesh B Chandrasekharan; Fu Huang; Zu-Wen Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-10       Impact factor: 11.205

9.  Species specific protein--DNA interactions may determine the chromatin units of genes in S.cerevisiae and in S.pombe.

Authors:  F Bernardi; M Zatchej; F Thoma
Journal:  EMBO J       Date:  1992-03       Impact factor: 11.598

Review 10.  Histone H2A variants in nucleosomes and chromatin: more or less stable?

Authors:  Clemens Bönisch; Sandra B Hake
Journal:  Nucleic Acids Res       Date:  2012-09-21       Impact factor: 16.971

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