Literature DB >> 20434460

Structure, evolutionary conservation, and conformational dynamics of Homo sapiens fascin-1, an F-actin crosslinking protein.

Reza Sharifi Sedeh1, Alexander A Fedorov, Elena V Fedorov, Shoichiro Ono, Fumio Matsumura, Steven C Almo, Mark Bathe.   

Abstract

Eukaryotes have several highly conserved actin-binding proteins that crosslink filamentous actin into compact ordered bundles present in distinct cytoskeletal processes, including microvilli, stereocilia and filopodia. Fascin is an actin-binding protein that is present predominantly in filopodia, which are believed to play a central role in normal and aberrant cell migration. An important outstanding question regards the molecular basis for the unique localization and functional properties of fascin compared with other actin crosslinking proteins. Here, we present the crystal structure of full-length Homo sapiens fascin-1, and examine its packing, conformational flexibility, and evolutionary sequence conservation. The structure reveals a novel arrangement of four tandem beta-trefoil domains that form a bi-lobed structure with approximate pseudo 2-fold symmetry. Each lobe has internal approximate pseudo 2-fold and pseudo 3-fold symmetry axes that are approximately perpendicular, with beta-hairpin triplets located symmetrically on opposite sides of each lobe that mutational data suggest are actin-binding domains. Sequence conservation analysis confirms the importance of hydrophobic core residues that stabilize the beta-trefoil fold, as well as interfacial residues that are likely to stabilize the overall fascin molecule. Sequence conservation also indicates highly conserved surface patches near the putative actin-binding domains of fascin, which conformational dynamics analysis suggests to be coupled via an allosteric mechanism that might have important functional implications for F-actin crosslinking by fascin. 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20434460      PMCID: PMC7141155          DOI: 10.1016/j.jmb.2010.04.043

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  93 in total

1.  Identification of distant homologues of fibroblast growth factors suggests a common ancestor for all beta-trefoil proteins.

Authors:  C P Ponting; R B Russell
Journal:  J Mol Biol       Date:  2000-10-06       Impact factor: 5.469

2.  Morphogenesis of liposomes encapsulating actin depends on the type of actin-crosslinking.

Authors:  M Honda; K Takiguchi; S Ishikawa; H Hotani
Journal:  J Mol Biol       Date:  1999-03-26       Impact factor: 5.469

Review 3.  Fascins, and their roles in cell structure and function.

Authors:  Nina Kureishy; Vasileia Sapountzi; Soren Prag; N Anilkumar; Josephine Clare Adams
Journal:  Bioessays       Date:  2002-04       Impact factor: 4.345

4.  The HSSP database of protein structure-sequence alignments.

Authors:  R Schneider; A de Daruvar; C Sander
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

5.  Three-fold structural pattern in the soybean trypsin inhibitor (Kunitz).

Authors:  A D McLachlan
Journal:  J Mol Biol       Date:  1979-10-09       Impact factor: 5.469

6.  SCOP: a structural classification of proteins database for the investigation of sequences and structures.

Authors:  A G Murzin; S E Brenner; T Hubbard; C Chothia
Journal:  J Mol Biol       Date:  1995-04-07       Impact factor: 5.469

7.  An evolutionary trace method defines binding surfaces common to protein families.

Authors:  O Lichtarge; H R Bourne; F E Cohen
Journal:  J Mol Biol       Date:  1996-03-29       Impact factor: 5.469

Review 8.  Roles of fascin in cell adhesion and motility.

Authors:  Josephine C Adams
Journal:  Curr Opin Cell Biol       Date:  2004-10       Impact factor: 8.382

9.  cDNA cloning and expression of the human homolog of the sea urchin fascin and Drosophila singed genes which encodes an actin-bundling protein.

Authors:  F M Duh; F Latif; Y Weng; L Geil; W Modi; T Stackhouse; F Matsumura; D R Duan; W M Linehan; M I Lerman
Journal:  DNA Cell Biol       Date:  1994-08       Impact factor: 3.311

10.  The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures.

Authors:  Ofir Goldenberg; Elana Erez; Guy Nimrod; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2008-10-29       Impact factor: 16.971

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  32 in total

1.  In vivo imaging of the actin polymerization state with two-photon fluorescence anisotropy.

Authors:  Harshad D Vishwasrao; Pierre Trifilieff; Eric R Kandel
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  β-Actin and fascin-2 cooperate to maintain stereocilia length.

Authors:  Benjamin J Perrin; Dana M Strandjord; Praveena Narayanan; Davin M Henderson; Kenneth R Johnson; James M Ervasti
Journal:  J Neurosci       Date:  2013-05-08       Impact factor: 6.167

3.  Molecular mechanism of fascin function in filopodial formation.

Authors:  Shengyu Yang; Fang-Ke Huang; Jianyun Huang; Shuai Chen; Jean Jakoncic; Alejandra Leo-Macias; Ruben Diaz-Avalos; Lin Chen; J Jillian Zhang; Xin-Yun Huang
Journal:  J Biol Chem       Date:  2012-11-26       Impact factor: 5.157

4.  A viscous two-phase model for contractile actomyosin bundles.

Authors:  Dietmar Oelz
Journal:  J Math Biol       Date:  2013-05-14       Impact factor: 2.259

Review 5.  The interplay between the proteolytic, invasive, and adhesive domains of invadopodia and their roles in cancer invasion.

Authors:  Or-Yam Revach; Benjamin Geiger
Journal:  Cell Adh Migr       Date:  2014       Impact factor: 3.405

6.  Monoubiquitination Inhibits the Actin Bundling Activity of Fascin.

Authors:  Shengchen Lin; Shuang Lu; Mentor Mulaj; Bin Fang; Tyler Keeley; Lixin Wan; Jihui Hao; Martin Muschol; Jianwei Sun; Shengyu Yang
Journal:  J Biol Chem       Date:  2016-11-22       Impact factor: 5.157

7.  Structural Insights into the Induced-fit Inhibition of Fascin by a Small-Molecule Inhibitor.

Authors:  Jianyun Huang; Raja Dey; Yufeng Wang; Jean Jakoncic; Igor Kurinov; Xin-Yun Huang
Journal:  J Mol Biol       Date:  2018-03-21       Impact factor: 5.469

8.  Mechanism of actin filament bundling by fascin.

Authors:  Silvia Jansen; Agnieszka Collins; Changsong Yang; Grzegorz Rebowski; Tatyana Svitkina; Roberto Dominguez
Journal:  J Biol Chem       Date:  2011-06-18       Impact factor: 5.157

9.  Fascin- and α-Actinin-Bundled Networks Contain Intrinsic Structural Features that Drive Protein Sorting.

Authors:  Jonathan D Winkelman; Cristian Suarez; Glen M Hocky; Alyssa J Harker; Alisha N Morganthaler; Jenna R Christensen; Gregory A Voth; James R Bartles; David R Kovar
Journal:  Curr Biol       Date:  2016-09-22       Impact factor: 10.834

10.  Met synergizes with p53 loss to induce mammary tumors that possess features of claudin-low breast cancer.

Authors:  Jennifer F Knight; Robert Lesurf; Hong Zhao; Dushanthi Pinnaduwage; Ryan R Davis; Sadiq M I Saleh; Dongmei Zuo; Monica A Naujokas; Naila Chughtai; Jason I Herschkowitz; Aleix Prat; Anna Marie Mulligan; William J Muller; Robert D Cardiff; Jeff P Gregg; Irene L Andrulis; Michael T Hallett; Morag Park
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-18       Impact factor: 11.205

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