Literature DB >> 20426434

Interaction of amino acids with the Au(111) surface: adsorption free energies from molecular dynamics simulations.

Martin Hoefling1, Francesco Iori, Stefano Corni, Kay-Eberhard Gottschalk.   

Abstract

Interactions of proteins with inorganic surfaces are of high importance in biological events and in modern biotechnological applications. Therefore, peptides have been engineered to recognize inorganic surfaces with high specificity. However, the underlying interactions are still not well understood. Here, we investigated the adsorption of amino acids as protein building blocks onto a Au(111) surface. In particular, using molecular dynamics simulations, we calculated the potential of mean force between all the 20 amino acids and the gold surface. We found a strong dependence of the binding affinities on the chemical character of the amino acids. Additionally, the interaction free energy is correlated with the propensity of amino acids to form beta-sheets, hinting at design principles for gold binding peptides and induction of beta-sheet formation near surfaces.

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Year:  2010        PMID: 20426434     DOI: 10.1021/la904765u

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  6 in total

1.  Application of advanced sampling and analysis methods to predict the structure of adsorbed protein on a material surface.

Authors:  Tigran M Abramyan; David L Hyde-Volpe; Steven J Stuart; Robert A Latour
Journal:  Biointerphases       Date:  2017-05-17       Impact factor: 2.456

2.  Binding Preferences of Amino Acids for Gold Nanoparticles: A Molecular Simulation Study.

Authors:  Qing Shao; Carol K Hall
Journal:  Langmuir       Date:  2016-07-27       Impact factor: 3.882

3.  Interaction of β-sheet folds with a gold surface.

Authors:  Martin Hoefling; Susanna Monti; Stefano Corni; Kay Eberhard Gottschalk
Journal:  PLoS One       Date:  2011-06-07       Impact factor: 3.240

4.  Two-dimensional honeycomb network through sequence-controlled self-assembly of oligopeptides.

Authors:  Sabine Abb; Ludger Harnau; Rico Gutzler; Stephan Rauschenbach; Klaus Kern
Journal:  Nat Commun       Date:  2016-01-12       Impact factor: 14.919

5.  Multiscale Modeling of Bio-Nano Interactions of Zero-Valent Silver Nanoparticles.

Authors:  Julia Subbotina; Vladimir Lobaskin
Journal:  J Phys Chem B       Date:  2022-02-08       Impact factor: 2.991

6.  Gold-Induced Fibril Growth: The Mechanism of Surface-Facilitated Amyloid Aggregation.

Authors:  Anika Gladytz; Bernd Abel; Herre Jelger Risselada
Journal:  Angew Chem Int Ed Engl       Date:  2016-08-11       Impact factor: 15.336

  6 in total

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