Literature DB >> 20426025

Probabilistic region matching in narrow-band endoscopy for targeted optical biopsy.

Selen Atasoy1, Ben Glocker, Stamatia Giannarou, Diana Mateus, Alexander Meining, Guang-Zhong Yang, Nassir Navab.   

Abstract

Recent advances in biophotonics have enabled in-vivo, in-situ histopathology for routine clinical applications. The non-invasive nature of these optical 'biopsy' techniques, however, entails the difficulty of identifying previously visited biopsy locations, particularly for surveillance examinations. This paper presents a novel region-matching approach for narrow-band endoscopy to facilitate retargeting the optical biopsy sites. The task of matching sparse affine covariant image regions is modelled in a Markov Random Field (MRF) framework. The proposed model incorporates appearance based region similarities as well as spatial correlations of neighbouring regions. In particular, a geometric constraint that is robust to deviations in relative positioning of the detected regions is introduced. In the proposed model, the appearance and geometric constraints are evaluated in the same space (photometry), allowing for their seamless integration into the MRF objective function. The performance of the method as compared to the existing state-of-the-art is evaluated with both in-vivo and simulation datasets with varying levels of visual complexities.

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Year:  2009        PMID: 20426025     DOI: 10.1007/978-3-642-04268-3_62

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  5 in total

1.  Registration of free-hand OCT daughter endoscopy to 3D organ reconstruction.

Authors:  Kristen L Lurie; Roland Angst; Eric J Seibel; Joseph C Liao; Audrey K Ellerbee Bowden
Journal:  Biomed Opt Express       Date:  2016-11-08       Impact factor: 3.732

2.  KinView: a visual comparative sequence analysis tool for integrated kinome research.

Authors:  Daniel Ian McSkimming; Shima Dastgheib; Timothy R Baffi; Dominic P Byrne; Samantha Ferries; Steven Thomas Scott; Alexandra C Newton; Claire E Eyers; Krzysztof J Kochut; Patrick A Eyers; Natarajan Kannan
Journal:  Mol Biosyst       Date:  2016-11-15

3.  Homographic Patch Feature Transform: A Robustness Registration for Gastroscopic Surgery.

Authors:  Weiling Hu; Xu Zhang; Bin Wang; Jiquan Liu; Huilong Duan; Ning Dai; Jianmin Si
Journal:  PLoS One       Date:  2016-04-07       Impact factor: 3.240

4.  Pose estimation of a markerless fiber bundle for endoscopic optical biopsy.

Authors:  Omar Zenteno; Sylvie Treuillet; Yves Lucas
Journal:  J Med Imaging (Bellingham)       Date:  2021-03-01

5.  An image retrieval framework for real-time endoscopic image retargeting.

Authors:  Menglong Ye; Edward Johns; Benjamin Walter; Alexander Meining; Guang-Zhong Yang
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-06-02       Impact factor: 2.924

  5 in total

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