Literature DB >> 20425826

Genotype-phenotype correlation in eight new patients with a deletion encompassing 2q31.1.

Diana Mitter1, Barbara Delle Chiaie, Hermann-Josef Lüdecke, Gabriele Gillessen-Kaesbach, Axel Bohring, Jürgen Kohlhase, Almuth Caliebe, Reiner Siebert, Albrecht Roepke, Maria A Ramos-Arroyo, Beatriz Nieva, Björn Menten, Bart Loeys, Geert Mortier, Dagmar Wieczorek.   

Abstract

Microdeletions of the 2q31.1 region are rare. We present the clinical and molecular findings of eight previously unreported patients with overlapping deletions in 2q31.1. The patients have a variable clinical phenotype and present with developmental delay (7/8), growth retardation (5/8), seizures (2/8) and a craniofacial dysmorphism consisting of microcephaly (4/8), short palpebral fissures (7/8), broad eyebrows with lateral flare (7/8), low-set ears with thickened helices and lobules (5/8), and micrognathia (6/8). Additional congenital anomalies were noted, including limb abnormalities (8/8), heart defects (3/8), genital anomalies (3/8), and craniosynostosis (1/8). Six of these microdeletions, ranging in size from 1.24 to 8.35 Mb, were identified by array CGH, one larger deletion (19.7 Mb) was detected by conventional karyotyping and further characterized by array CGH analysis. The smallest region of overlap in all eight patients spans at most 88 kb and includes only the WIPF1 gene. This gene codes for the WAS/WASL interacting protein family member 1. The patients described here do not present with clinical signs of the Wiskott-Aldrich syndrome and the deletion of this single gene does not allow explaining the phenotype in our patients. It is likely that the deletion of different but overlapping sets of genes from 2q31 is responsible for the clinical variability in these patients. To further dissect the complex phenotype associated with deletions in 2q31, additional patients with overlapping phenotypes should be examined with array CGH. This should help to link particular phenotypes to specific genes, and add to our understanding of the underlying developmental processes. Copyright 2010 Wiley-Liss, Inc.

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Year:  2010        PMID: 20425826     DOI: 10.1002/ajmg.a.33344

Source DB:  PubMed          Journal:  Am J Med Genet A        ISSN: 1552-4825            Impact factor:   2.802


  9 in total

1.  Refinement of the Region for Split Hand/Foot Malformation 5 on 2q31.1.

Authors:  A Theisen; J A Rosenfeld; K Shane; K L McBride; J F Atkin; C Gaba; J Hoo; T W Kurczynski; R E Schnur; L B Coffey; E H Zackai; L Schimmenti; N Friedman; M Zabukovec; S Ball; R Pagon; A Lucas; C K Brasington; J E Spence; S Sparks; V Banks; W Smith; T Friedberg; P R Wyatt; M Aust; R Tervo; A Crowley; D Skidmore; A N Lamb; B Ravnan; T Sahoo; R Schultz; B S Torchia; M Sgro; D Chitayat; L G Shaffer
Journal:  Mol Syndromol       Date:  2011-05-18

Review 2.  Genetic Basis for Congenital Heart Disease: Revisited: A Scientific Statement From the American Heart Association.

Authors:  Mary Ella Pierpont; Martina Brueckner; Wendy K Chung; Vidu Garg; Ronald V Lacro; Amy L McGuire; Seema Mital; James R Priest; William T Pu; Amy Roberts; Stephanie M Ware; Bruce D Gelb; Mark W Russell
Journal:  Circulation       Date:  2018-11-20       Impact factor: 29.690

Review 3.  Disruption of long-range gene regulation in human genetic disease: a kaleidoscope of general principles, diverse mechanisms and unique phenotypic consequences.

Authors:  Shipra Bhatia; Dirk A Kleinjan
Journal:  Hum Genet       Date:  2014-02-05       Impact factor: 4.132

Review 4.  Role of titin in cardiomyopathy: from DNA variants to patient stratification.

Authors:  James S Ware; Stuart A Cook
Journal:  Nat Rev Cardiol       Date:  2017-12-14       Impact factor: 32.419

5.  Investigation of TBR1 Hemizygosity: Four Individuals with 2q24 Microdeletions.

Authors:  R N Traylor; W B Dobyns; J A Rosenfeld; P Wheeler; J E Spence; A M Bandholz; E V Bawle; E P Carmany; C M Powell; B Hudson; R A Schultz; L G Shaffer; B C Ballif
Journal:  Mol Syndromol       Date:  2012-08-23

6.  Impact of copy number variations (CNVs) on long-range gene regulation at the HoxD locus.

Authors:  Thomas Montavon; Laurie Thevenet; Denis Duboule
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-07       Impact factor: 11.205

7.  Genetic Basis of Human Congenital Heart Disease.

Authors:  Shannon N Nees; Wendy K Chung
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-09-01       Impact factor: 9.708

8.  Prioritization of genes driving congenital phenotypes of patients with de novo genomic structural variants.

Authors:  Sjors Middelkamp; Judith M Vlaar; Jacques Giltay; Jerome Korzelius; Nicolle Besselink; Sander Boymans; Roel Janssen; Lisanne de la Fonteijne; Ellen van Binsbergen; Markus J van Roosmalen; Ron Hochstenbach; Daniela Giachino; Michael E Talkowski; Wigard P Kloosterman; Edwin Cuppen
Journal:  Genome Med       Date:  2019-12-04       Impact factor: 11.117

Review 9.  Of mice and men: molecular genetics of congenital heart disease.

Authors:  Troels Askhøj Andersen; Karin de Linde Lind Troelsen; Lars Allan Larsen
Journal:  Cell Mol Life Sci       Date:  2013-08-10       Impact factor: 9.261

  9 in total

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