Literature DB >> 20422205

Genetic variation of 10 X chromosomal STR loci in Indian population.

Sanjukta Mukerjee1, Tania Ghosh, D Kalpana, Meeta Mukherjee, Anil Kumar Sharma.   

Abstract

X chromosomal short tandem repeats have the potential to complement the analyses of the autosomal, Y chromosomal, and mitochondrial DNA markers in forensics and population genetics, and extensive research on X chromosomal markers is being carried out. In the present study, a decaplex for the co-amplification of ten X chromosomal microsatellite loci (DXS6807, DXS8378, DXS7132, DXS6809, DXS6789, DXS101, DXS7133, GATA172D05, HPRTB, and GATA31E08) was optimized and 749 blood samples of unrelated male individuals from the four major linguistic families of India were analyzed. The number of alleles for the studied loci ranged from 7-16 while the gene diversity values varied from 0.408 to 0.855. Two new alleles were observed for the loci DXS101 and HPRTB. Statistical parameters of forensic interest were calculated and all loci were found to be polymorphic. High power of discrimination was observed for the loci DXS101, DXS6809, and DXS6789. The present study demonstrates the efficacy of these X-linked markers for human identification and kinship analysis.

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Year:  2010        PMID: 20422205     DOI: 10.1007/s00414-010-0456-2

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  21 in total

1.  DXS101: a highly polymorphic X-linked STR.

Authors:  J Edelmann; R Szibor
Journal:  Int J Legal Med       Date:  2001       Impact factor: 2.686

2.  Population data of four X-chromosome markers in Tuscany, and their use in a deficiency paternity case.

Authors:  Chiara Toni; Silvano Presciuttini; Isabella Spinetti; Ranieri Domenici
Journal:  Forensic Sci Int       Date:  2003-11-26       Impact factor: 2.395

Review 3.  Use of X-linked markers for forensic purposes.

Authors:  R Szibor; M Krawczak; S Hering; J Edelmann; E Kuhlisch; D Krause
Journal:  Int J Legal Med       Date:  2003-02-15       Impact factor: 2.686

4.  Genetic analysis of 18 X-linked short tandem repeat markers in Korean population.

Authors:  Sang Hee Shin; Jin Seok Yu; Sun Wha Park; Gi Sik Min; Ki Wha Chung
Journal:  Forensic Sci Int       Date:  2005-01-06       Impact factor: 2.395

5.  Population genetic evaluation of eight X-chromosomal short tandem repeat loci using Mentype Argus X-8 PCR amplification kit.

Authors:  Dorit Becker; Heike Rodig; Christa Augustin; Jeanett Edelmann; Frank Götz; Sandra Hering; Reinhard Szibor; Werner Brabetz
Journal:  Forensic Sci Int Genet       Date:  2007-09-29       Impact factor: 4.882

Review 6.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

7.  A GEP-ISFG collaborative study on the optimization of an X-STR decaplex: data on 15 Iberian and Latin American populations.

Authors:  Leonor Gusmão; Paula Sánchez-Diz; Cíntia Alves; Iva Gomes; María Teresa Zarrabeitia; Mariel Abovich; Ivannia Atmetlla; Cecilia Bobillo; Luisa Bravo; Juan Builes; Laura Cainé; Raquel Calvo; Elizeu Carvalho; Mónica Carvalho; Regina Cicarelli; Laura Catelli; Daniel Corach; Marta Espinoza; Oscar García; Marcelo Malaghini; Joyce Martins; Fátima Pinheiro; Maria João Porto; Eduardo Raimondi; Jose Antonio Riancho; Amelia Rodríguez; Anayanci Rodríguez; Belén Rodríguez Cardozo; Vicente Schneider; Sandra Silva; Celso Tavares; Ulises Toscanini; Carlos Vullo; Martin Whittle; Iñaki Yurrebaso; Angel Carracedo; António Amorim
Journal:  Int J Legal Med       Date:  2008-12-12       Impact factor: 2.686

8.  Development and forensic validation of a new multiplex PCR assay with 12 X-chromosomal short tandem repeats.

Authors:  Stefania Turrina; Renzo Atzei; Giulia Filippini; Domenico De Leo
Journal:  Forensic Sci Int Genet       Date:  2007-02-26       Impact factor: 4.882

9.  Genetic polymorphisms of 10 X-chromosome STR loci in Chinese Daur ethnic minority group.

Authors:  Xiaoyan Zeng; Allah Rakha; Shengbin Li
Journal:  Leg Med (Tokyo)       Date:  2009-03-28       Impact factor: 1.376

10.  Nomenclature discrepancies in the HPRTB short tandem repeat.

Authors:  Reinhard Szibor; Jeanett Edelmann; Sandra Hering; Iva Gomes; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2009-01-10       Impact factor: 2.686

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