Literature DB >> 20420837

NirJ, a radical SAM family member of the d1 heme biogenesis cluster.

Amanda A Brindley1, Richard Zajicek, Martin J Warren, Stuart J Ferguson, Stephen E J Rigby.   

Abstract

NirJ is involved in the transformation of precorrin-2 into heme d(1), although its precise role in the process has not been established. The purified protein was found to contain a 4Fe-4S centre, in line with the prediction that it belongs to the radical SAM class of enzymes. This was further confirmed by binding of S-adenosyl-L-methionine (SAM) to dithionite-reduced NirJ, which resulted in a decrease in the signal intensity and in a shift to higher field of the [4Fe-4S](1+) EPR signal. Significantly, though, this approach also led to the appearance of a small but reproducible organic radical signal that was associated with about 2% of the NirJ molecules and was affected by the incorporation of SAM deuterated at the 5' adenosyl group. Copyright 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20420837     DOI: 10.1016/j.febslet.2010.04.053

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  13 in total

1.  X-ray and EPR Characterization of the Auxiliary Fe-S Clusters in the Radical SAM Enzyme PqqE.

Authors:  Ian Barr; Troy A Stich; Anthony S Gizzi; Tyler L Grove; Jeffrey B Bonanno; John A Latham; Tyler Chung; Carrie M Wilmot; R David Britt; Steven C Almo; Judith P Klinman
Journal:  Biochemistry       Date:  2018-02-06       Impact factor: 3.162

Review 2.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

3.  Parallel pathways for nitrite reduction during anaerobic growth in Thermus thermophilus.

Authors:  Laura Alvarez; Carlos Bricio; Aurelio Hidalgo; José Berenguer
Journal:  J Bacteriol       Date:  2014-01-17       Impact factor: 3.490

4.  Molecular hijacking of siroheme for the synthesis of heme and d1 heme.

Authors:  Shilpa Bali; Andrew D Lawrence; Susana A Lobo; Lígia M Saraiva; Bernard T Golding; David J Palmer; Mark J Howard; Stuart J Ferguson; Martin J Warren
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-03       Impact factor: 11.205

5.  Characterization of NocL involved in thiopeptide nocathiacin I biosynthesis: a [4Fe-4S] cluster and the catalysis of a radical S-adenosylmethionine enzyme.

Authors:  Qi Zhang; Dandan Chen; Jun Lin; Rijing Liao; Wei Tong; Zhinan Xu; Wen Liu
Journal:  J Biol Chem       Date:  2011-03-29       Impact factor: 5.157

Review 6.  Prokaryotic Heme Biosynthesis: Multiple Pathways to a Common Essential Product.

Authors:  Harry A Dailey; Tamara A Dailey; Svetlana Gerdes; Dieter Jahn; Martina Jahn; Mark R O'Brian; Martin J Warren
Journal:  Microbiol Mol Biol Rev       Date:  2017-01-25       Impact factor: 11.056

7.  Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification.

Authors:  Daniel H Haft; Malay Kumar Basu
Journal:  J Bacteriol       Date:  2011-04-08       Impact factor: 3.490

8.  Distribution and properties of the genes encoding the biosynthesis of the bacterial cofactor, pyrroloquinoline quinone.

Authors:  Yao-Qing Shen; Florence Bonnot; Erin M Imsand; Jordan M RoseFigura; Kimmen Sjölander; Judith P Klinman
Journal:  Biochemistry       Date:  2012-03-09       Impact factor: 3.162

9.  Recent advances in the biosynthesis of modified tetrapyrroles: the discovery of an alternative pathway for the formation of heme and heme d 1.

Authors:  Shilpa Bali; David J Palmer; Susanne Schroeder; Stuart J Ferguson; Martin J Warren
Journal:  Cell Mol Life Sci       Date:  2014-02-11       Impact factor: 9.261

Review 10.  Transferable denitrification capability of Thermus thermophilus.

Authors:  Laura Alvarez; Carlos Bricio; Alba Blesa; Aurelio Hidalgo; José Berenguer
Journal:  Appl Environ Microbiol       Date:  2013-10-18       Impact factor: 4.792

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