Literature DB >> 20408055

An improved one-pot synthesis of nucleoside 5'-triphosphate analogues.

Irina Gillerman1, Bilha Fischer.   

Abstract

Nucleoside 5'-triphosphate (NTP) analogues are valuable tools for biochemical and medicinal research. Therefore, a facile and efficient synthesis of NTP analogues is required. Here, we report on an improved nucleoside 5'-triphosphorylation procedure to obtain pure products after liquid chromotagrpahy (LC) separation with no need for high performance liquid chromatography (HPLC) purification. To improve the selectivity of the reaction we attempted the optimization of several parameters such as solvent, pyrophosphate nucleophilicity, time and temperature of the reaction. Eventually, the reaction was optimized by decreasing the temperature to -15 degrees C and increasing the reaction time to 2 hours, based on monitoring time-dependent product distribution using (31)P NMR. Furthermore, the NTPs were obtained as pure products after LC separation, which was impossible in the original Ludwig procedure. Good yields were obtained for all studied natural and synthetic nucleosides.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20408055     DOI: 10.1080/15257771003709569

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  9 in total

1.  The mechanisms of RNA SHAPE chemistry.

Authors:  Jennifer L McGinnis; Jack A Dunkle; Jamie H D Cate; Kevin M Weeks
Journal:  J Am Chem Soc       Date:  2012-04-05       Impact factor: 15.419

2.  Synthesis and evaluation of an alkyne-modified ATP analog for enzymatic incorporation into RNA.

Authors:  Yuxuan Zheng; Peter A Beal
Journal:  Bioorg Med Chem Lett       Date:  2016-02-18       Impact factor: 2.823

3.  Protection-free one-pot synthesis of 2'-deoxynucleoside 5'-triphosphates and DNA polymerization.

Authors:  Julianne Caton-Williams; Matthew Smith; Nicolas Carrasco; Zhen Huang
Journal:  Org Lett       Date:  2011-07-26       Impact factor: 6.005

4.  A two-residue nascent-strand steric gate controls synthesis of 2'-O-methyl- and 2'-O-(2-methoxyethyl)-RNA.

Authors:  Niklas Freund; Alexander I Taylor; Sebastian Arangundy-Franklin; Nithya Subramanian; Sew-Yeu Peak-Chew; Amy M Whitaker; Bret D Freudenthal; Mikhail Abramov; Piet Herdewijn; Philipp Holliger
Journal:  Nat Chem       Date:  2022-10-13       Impact factor: 24.274

5.  8-BuS-ATP derivatives as specific NTPDase1 inhibitors.

Authors:  Joanna Lecka; Irina Gillerman; Michel Fausther; Mabrouka Salem; Mercedes N Munkonda; Jean-Philippe Brosseau; Christine Cadot; Mireia Martín-Satué; Pedro d'Orléans-Juste; Eric Rousseau; Donald Poirier; Beat Künzli; Bilha Fischer; Jean Sévigny
Journal:  Br J Pharmacol       Date:  2013-05       Impact factor: 8.739

6.  Use of a novel 5'-regioselective phosphitylating reagent for one-pot synthesis of nucleoside 5'-triphosphates from unprotected nucleosides.

Authors:  Julianne Caton-Williams; Rudiona Hoxhaj; Bilal Fiaz; Zhen Huang
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2013-03

7.  The synthesis of 2'-methylseleno adenosine and guanosine 5'-triphosphates.

Authors:  Tobias Santner; Vanessa Siegmund; Andreas Marx; Ronald Micura
Journal:  Bioorg Med Chem       Date:  2012-02-04       Impact factor: 3.641

8.  Synthesis and antiviral activity of a series of 1'-substituted 4-aza-7,9-dideazaadenosine C-nucleosides.

Authors:  Aesop Cho; Oliver L Saunders; Thomas Butler; Lijun Zhang; Jie Xu; Jennifer E Vela; Joy Y Feng; Adrian S Ray; Choung U Kim
Journal:  Bioorg Med Chem Lett       Date:  2012-03-08       Impact factor: 2.823

Review 9.  Nucleoside triphosphates--building blocks for the modification of nucleic acids.

Authors:  Marcel Hollenstein
Journal:  Molecules       Date:  2012-11-15       Impact factor: 4.411

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.