Literature DB >> 20406386

Did gene family expansions during the Eocene-Oligocene boundary climate cooling play a role in Pooideae adaptation to cool climates?

Simen Rød Sandve1, Siri Fjellheim.   

Abstract

Adaptation to cool environments is a common feature in the core group of the grass subfamily Pooideae (Triticeae and Poeae). This suggest an ancient evolutionary origin of low temperature stress tolerance dating back prior to the initiation of taxonomic divergence of core Pooideae species. Viewing the Pooideae evolution in a palaeo-climatic perspective reveals that taxonomic divergence of the core Pooideae group initiated shortly after a global super-cooling period at the Eocene-Oligocene boundary (approximately 33.5-26 Ma). This global climate cooling altered distributions of plants and animals and must have imposed selection pressure for improved low temperature stress responses. Lineage-specific gene family expansions are known to be involved in adaptation to new environmental stresses. In Pooideae, two gene families involved in low temperature stress response, the C-repeat binding factor (CBF) and fructosyl transferase (FT) gene families, has undergone lineage-specific expansions. We investigated the timing of these gene family expansions by molecular dating and found that Pooideae-specific expansion events in CBF and FT gene families took place during Eocene-Oligocene super-cooling period. We hypothesize that the E-O super-cooling exerted selection pressure for improved low temperature stress response and frost tolerance in a core Pooideae ancestor, and that those individuals with multiple copies of CBF and FT genes were favoured.

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Year:  2010        PMID: 20406386     DOI: 10.1111/j.1365-294X.2010.04629.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  18 in total

1.  Unexpected presence of graminan- and levan-type fructans in the evergreen frost-hardy eudicot Pachysandra terminalis (Buxaceae): purification, cloning, and functional analysis of a 6-SST/6-SFT enzyme.

Authors:  Wim Van den Ende; Marlies Coopman; Stefan Clerens; Rudy Vergauwen; Katrien Le Roy; Willem Lammens; André Van Laere
Journal:  Plant Physiol       Date:  2010-10-29       Impact factor: 8.340

2.  Evolution of Cold Acclimation and Its Role in Niche Transition in the Temperate Grass Subfamily Pooideae.

Authors:  Marian Schubert; Lars Grønvold; Simen R Sandve; Torgeir R Hvidsten; Siri Fjellheim
Journal:  Plant Physiol       Date:  2019-03-08       Impact factor: 8.340

3.  Diverse Strategies Coping with Winter in Barley and its Relatives.

Authors:  Yunqing Yu
Journal:  Plant Physiol       Date:  2019-05       Impact factor: 8.340

4.  The barley Frost resistance-H2 locus.

Authors:  Marianna Pasquariello; Delfina Barabaschi; Axel Himmelbach; Burkhard Steuernagel; Ruvini Ariyadasa; Nils Stein; Francesco Gandolfi; Elena Tenedini; Isabella Bernardis; Enrico Tagliafico; Nicola Pecchioni; Enrico Francia
Journal:  Funct Integr Genomics       Date:  2014-01-18       Impact factor: 3.410

5.  Evidence for an Early Origin of Vernalization Responsiveness in Temperate Pooideae Grasses.

Authors:  Meghan McKeown; Marian Schubert; Thomas Marcussen; Siri Fjellheim; Jill C Preston
Journal:  Plant Physiol       Date:  2016-07-29       Impact factor: 8.340

6.  Compact genomes and complex evolution in the genus Brachypodium.

Authors:  Elzbieta Wolny; Karolina Lesniewska; Robert Hasterok; Tim Langdon
Journal:  Chromosoma       Date:  2010-12-30       Impact factor: 4.316

7.  Cbf14 copy number variation in the A, B, and D genomes of diploid and polyploid wheat.

Authors:  Taniya Dhillon; Eric J Stockinger
Journal:  Theor Appl Genet       Date:  2013-08-06       Impact factor: 5.699

8.  The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics.

Authors:  Matthias Pfeifer; Mihaela Martis; Torben Asp; Klaus F X Mayer; Thomas Lübberstedt; Stephen Byrne; Ursula Frei; Bruno Studer
Journal:  Plant Physiol       Date:  2012-11-26       Impact factor: 8.340

9.  Copy number and haplotype variation at the VRN-A1 and central FR-A2 loci are associated with frost tolerance in hexaploid wheat.

Authors:  Jie Zhu; Stephen Pearce; Adrienne Burke; Deven Robert See; Daniel Z Skinner; Jorge Dubcovsky; Kimberly Garland-Campbell
Journal:  Theor Appl Genet       Date:  2014-03-14       Impact factor: 5.699

10.  Large deletions in the CBF gene cluster at the Fr-B2 locus are associated with reduced frost tolerance in wheat.

Authors:  Stephen Pearce; Jie Zhu; Ákos Boldizsár; Attila Vágújfalvi; Adrienne Burke; Kimberley Garland-Campbell; Gábor Galiba; Jorge Dubcovsky
Journal:  Theor Appl Genet       Date:  2013-07-25       Impact factor: 5.699

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