Literature DB >> 20404169

Molecular basis for SH3 domain regulation of F-BAR-mediated membrane deformation.

Yijian Rao1, Qingjun Ma, Ardeschir Vahedi-Faridi, Anna Sundborger, Arndt Pechstein, Dmytro Puchkov, Lin Luo, Oleg Shupliakov, Wolfram Saenger, Volker Haucke.   

Abstract

Members of the Bin/amphiphysin/Rvs (BAR) domain protein superfamily are involved in membrane remodeling in various cellular pathways ranging from endocytic vesicle and T-tubule formation to cell migration and neuromorphogenesis. Membrane curvature induction and stabilization are encoded within the BAR or Fer-CIP4 homology-BAR (F-BAR) domains, alpha-helical coiled coils that dimerize into membrane-binding modules. BAR/F-BAR domain proteins often contain an SH3 domain, which recruits binding partners such as the oligomeric membrane-fissioning GTPase dynamin. How precisely BAR/F-BAR domain-mediated membrane deformation is regulated at the cellular level is unknown. Here we present the crystal structures of full-length syndapin 1 and its F-BAR domain. Our data show that syndapin 1 F-BAR-mediated membrane deformation is subject to autoinhibition by its SH3 domain. Release from the clamped conformation is driven by association of syndapin 1 SH3 with the proline-rich domain of dynamin 1, thereby unlocking its potent membrane-bending activity. We hypothesize that this mechanism might be commonly used to regulate BAR/F-BAR domain-induced membrane deformation and to potentially couple this process to dynamin-mediated fission. Our data thus suggest a structure-based model for SH3-mediated regulation of BAR/F-BAR domain function.

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Year:  2010        PMID: 20404169      PMCID: PMC2889545          DOI: 10.1073/pnas.1003478107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Dynamin and the actin cytoskeleton cooperatively regulate plasma membrane invagination by BAR and F-BAR proteins.

Authors:  Toshiki Itoh; Kai S Erdmann; Aurelien Roux; Bianca Habermann; Hauke Werner; Pietro De Camilli
Journal:  Dev Cell       Date:  2005-12       Impact factor: 12.270

2.  Molecular mechanism of membrane constriction and tubulation mediated by the F-BAR protein Pacsin/Syndapin.

Authors:  Qi Wang; Marcos V A S Navarro; Gary Peng; Evan Molinelli; Shih Lin Goh; Bret L Judson; Kanagalaghatta R Rajashankar; Holger Sondermann
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-19       Impact factor: 11.205

3.  Amphipathic motifs in BAR domains are essential for membrane curvature sensing.

Authors:  Vikram K Bhatia; Kenneth L Madsen; Pierre-Yves Bolinger; Andreas Kunding; Per Hedegård; Ulrik Gether; Dimitrios Stamou
Journal:  EMBO J       Date:  2009-10-08       Impact factor: 11.598

4.  Syndapin I is the phosphorylation-regulated dynamin I partner in synaptic vesicle endocytosis.

Authors:  Victor Anggono; Karen J Smillie; Mark E Graham; Valentina A Valova; Michael A Cousin; Phillip J Robinson
Journal:  Nat Neurosci       Date:  2006-04-30       Impact factor: 24.884

5.  Novel Src homology 3 domain-binding motifs identified from proteomic screen of a Pro-rich region.

Authors:  Christina Y H Jia; Jing Nie; Chenggang Wu; Chengjun Li; Shawn S-C Li
Journal:  Mol Cell Proteomics       Date:  2005-05-31       Impact factor: 5.911

6.  Functional partnership between amphiphysin and dynamin in clathrin-mediated endocytosis.

Authors:  K Takei; V I Slepnev; V Haucke; P De Camilli
Journal:  Nat Cell Biol       Date:  1999-05       Impact factor: 28.824

7.  The F-BAR domain of srGAP2 induces membrane protrusions required for neuronal migration and morphogenesis.

Authors:  Sabrice Guerrier; Jaeda Coutinho-Budd; Takayuki Sassa; Aurélie Gresset; Nicole Vincent Jordan; Keng Chen; Wei-Lin Jin; Adam Frost; Franck Polleux
Journal:  Cell       Date:  2009-09-04       Impact factor: 41.582

8.  Structural requirements for PACSIN/Syndapin operation during zebrafish embryonic notochord development.

Authors:  Melissa A Edeling; Subramaniam Sanker; Takaki Shima; P K Umasankar; Stefan Höning; Hye Y Kim; Lance A Davidson; Simon C Watkins; Michael Tsang; David J Owen; Linton M Traub
Journal:  PLoS One       Date:  2009-12-03       Impact factor: 3.240

9.  F-BAR proteins of the syndapin family shape the plasma membrane and are crucial for neuromorphogenesis.

Authors:  Elavarasi Dharmalingam; Akvile Haeckel; Roser Pinyol; Lukas Schwintzer; Dennis Koch; Michael Manfred Kessels; Britta Qualmann
Journal:  J Neurosci       Date:  2009-10-21       Impact factor: 6.167

10.  How curved membranes recruit amphipathic helices and protein anchoring motifs.

Authors:  Nikos S Hatzakis; Vikram K Bhatia; Jannik Larsen; Kenneth L Madsen; Pierre-Yves Bolinger; Andreas H Kunding; John Castillo; Ulrik Gether; Per Hedegård; Dimitrios Stamou
Journal:  Nat Chem Biol       Date:  2009-09-13       Impact factor: 15.040

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  80 in total

1.  Single point mutation in Bin/Amphiphysin/Rvs (BAR) sequence of endophilin impairs dimerization, membrane shaping, and Src homology 3 domain-mediated partnership.

Authors:  Anna Gortat; Mabel Jouve San-Roman; Christian Vannier; Anne A Schmidt
Journal:  J Biol Chem       Date:  2011-12-13       Impact factor: 5.157

2.  Cloning, purification, crystallization and preliminary X-ray diffraction analysis of mouse PACSIN 3 protein.

Authors:  Xiaoyun Bai; Geng Meng; Xiaofeng Zheng
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-25

3.  Cell biology: How to don a coat.

Authors:  Linton M Traub; Beverly Wendland
Journal:  Nature       Date:  2010-06-03       Impact factor: 49.962

Review 4.  Zooming in on the molecular mechanisms of endocytic budding by time-resolved electron microscopy.

Authors:  Fatima-Zahra Idrissi; María Isabel Geli
Journal:  Cell Mol Life Sci       Date:  2013-09-04       Impact factor: 9.261

5.  Distinct roles for F-BAR proteins Cdc15p and Bzz1p in actin polymerization at sites of endocytosis in fission yeast.

Authors:  Rajesh Arasada; Thomas D Pollard
Journal:  Curr Biol       Date:  2011-09-01       Impact factor: 10.834

6.  Phosphorylation-dependent regulation of the F-BAR protein Hof1 during cytokinesis.

Authors:  Franz Meitinger; Martin E Boehm; Astrid Hofmann; Birgit Hub; Hanswalter Zentgraf; Wolf D Lehmann; Gislene Pereira
Journal:  Genes Dev       Date:  2011-04-15       Impact factor: 11.361

Review 7.  Protein scaffolds in the coupling of synaptic exocytosis and endocytosis.

Authors:  Volker Haucke; Erwin Neher; Stephan J Sigrist
Journal:  Nat Rev Neurosci       Date:  2011-02-09       Impact factor: 34.870

Review 8.  Membrane shaping by the Bin/amphiphysin/Rvs (BAR) domain protein superfamily.

Authors:  Yijian Rao; Volker Haucke
Journal:  Cell Mol Life Sci       Date:  2011-07-17       Impact factor: 9.261

Review 9.  Let's go bananas: revisiting the endocytic BAR code.

Authors:  Britta Qualmann; Dennis Koch; Michael Manfred Kessels
Journal:  EMBO J       Date:  2011-08-31       Impact factor: 11.598

10.  Casein kinase 2 phosphorylation of protein kinase C and casein kinase 2 substrate in neurons (PACSIN) 1 protein regulates neuronal spine formation.

Authors:  Sylvia Schael; Julian Nüchel; Stefan Müller; Philipp Petermann; Jan Kormann; Isabel Pérez-Otaño; Sonia Marco Martínez; Mats Paulsson; Markus Plomann
Journal:  J Biol Chem       Date:  2013-02-18       Impact factor: 5.157

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