Literature DB >> 20401331

Mixtures of GAMs for habitat suitability analysis with overdispersed presence / absence data.

David R J Pleydell1, Stéphane Chrétien.   

Abstract

A new approach to species distribution modelling based on unsupervised classification via a finite mixture of GAMs incorporating habitat suitability curves is proposed. A tailored EM algorithm is outlined for computing maximum likelihood estimates. Several submodels incorporating various parameter constraints are explored. Simulation studies confirm, that under certain constraints, the habitat suitability curves are recovered with good precision. The method is also applied to a set of real data concerning presence/absence of observable small mammal indices collected on the Tibetan plateau. The resulting classification was found to correspond to species-level differences in habitat preference described in previous ecological work.

Entities:  

Year:  2010        PMID: 20401331      PMCID: PMC2855165          DOI: 10.1016/j.csda.2009.11.016

Source DB:  PubMed          Journal:  Comput Stat Data Anal        ISSN: 0167-9473            Impact factor:   1.681


  2 in total

1.  Computational Techniques for Spatial Logistic Regression with Large Datasets.

Authors:  Christopher J Paciorek
Journal:  Comput Stat Data Anal       Date:  2007-05-01       Impact factor: 1.681

Review 2.  Interactions between landscape changes and host communities can regulate Echinococcus multilocularis transmission.

Authors:  P Giraudoux; P S Craig; P Delattre; G Bao; B Bartholomot; S Harraga; J P Quéré; F Raoul; Y Wang; D Shi; D A Vuitton
Journal:  Parasitology       Date:  2003       Impact factor: 3.234

  2 in total
  3 in total

1.  Modeling intensive longitudinal data with mixtures of nonparametric trajectories and time-varying effects.

Authors:  John J Dziak; Runze Li; Xianming Tan; Saul Shiffman; Mariya P Shiyko
Journal:  Psychol Methods       Date:  2015-09-21

2.  A random forest approach for predicting the presence of Echinococcus multilocularis intermediate host Ochotona spp. presence in relation to landscape characteristics in western China.

Authors:  Christopher G Marston; F Mark Danson; Richard P Armitage; Patrick Giraudoux; David R J Pleydell; Qian Wang; Jiamin Qui; Philip S Craig
Journal:  Appl Geogr       Date:  2014-12-01

3.  Spatiotemporal patterns and environmental drivers of human echinococcoses over a twenty-year period in Ningxia Hui Autonomous Region, China.

Authors:  Angela M Cadavid Restrepo; Yu Rong Yang; Donald P McManus; Darren J Gray; Tamsin S Barnes; Gail M Williams; Ricardo J Soares Magalhães; Nicholas A S Hamm; Archie C A Clements
Journal:  Parasit Vectors       Date:  2018-02-22       Impact factor: 3.876

  3 in total

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