Literature DB >> 20392025

Replicated sampling increases efficiency in monitoring biological populations.

Brian Dennis1, José Miguel Ponciano, Mark L Taper.   

Abstract

Observation or sampling error in population monitoring can cause serious degradation of the inferences, such as estimates of trend or risk, that ecologists and managers frequently seek to make with time-series observations of population abundances. We show that replicating the sampling process can considerably improve the information obtained from population monitoring. At each sampling time the sampling method would be repeated, either simultaneously or within a short time. In this study we examine the potential value of replicated sampling to population monitoring using a density-dependent population model. We modify an existing population time-series model, the Gompertz state-space model, to incorporate replicated sampling, and we develop maximum-likelihood and restricted maximum-likelihood estimates of model parameters. Depending on sampling protocols, replication may or may not entail substantial extra cost. Some sampling programs already have replicated samples, but the samples are aggregated or pooled into one estimate of population abundance; such practice of aggregating samples, according to our model, loses considerable information about model parameters. The gains from replicated sampling are realized in substantially improved statistical inferences about model parameters, especially inferences for sorting out the contributions of process noise and observation error to observed population variability.

Mesh:

Year:  2010        PMID: 20392025     DOI: 10.1890/08-1095.1

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  11 in total

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2.  Density-dependent state-space model for population-abundance data with unequal time intervals.

Authors:  Brian Dennis; José Miguel Ponciano
Journal:  Ecology       Date:  2014-08       Impact factor: 5.499

3.  Ecological change points: The strength of density dependence and the loss of history.

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4.  Combined Influences of Model Choice, Data Quality, and Data Quantity When Estimating Population Trends.

Authors:  Pamela Rueda-Cediel; Kurt E Anderson; Tracey J Regan; Janet Franklin; Helen M Regan
Journal:  PLoS One       Date:  2015-07-15       Impact factor: 3.240

5.  Resampling method for applying density-dependent habitat selection theory to wildlife surveys.

Authors:  Olivia Tardy; Ariane Massé; Fanie Pelletier; Daniel Fortin
Journal:  PLoS One       Date:  2015-06-04       Impact factor: 3.240

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7.  Functional group based marine ecosystem assessment for the Bay of Biscay via elasticity analysis.

Authors:  Geoffrey R Hosack; Verena M Trenkel
Journal:  PeerJ       Date:  2019-08-09       Impact factor: 2.984

8.  Identifying biotic drivers of population dynamics in a benthic-pelagic community.

Authors:  Louise Forsblom; Andreas Lindén; Jonna Engström-Öst; Maiju Lehtiniemi; Erik Bonsdorff
Journal:  Ecol Evol       Date:  2021-03-28       Impact factor: 2.912

9.  State-space models' dirty little secrets: even simple linear Gaussian models can have estimation problems.

Authors:  Marie Auger-Méthé; Chris Field; Christoffer M Albertsen; Andrew E Derocher; Mark A Lewis; Ian D Jonsen; Joanna Mills Flemming
Journal:  Sci Rep       Date:  2016-05-25       Impact factor: 4.379

10.  Improving inference for nonlinear state-space models of animal population dynamics given biased sequential life stage data.

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Journal:  Biometrics       Date:  2020-04-25       Impact factor: 2.571

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