Literature DB >> 20384681

A processive riboantiterminator seeks a switch to make biofilms.

Irina Artsimovitch1.   

Abstract

Since the discovery of the first signal-sensing RNA structure by Grundy and Henkin in 1993, the list of cis-acting riboregulators has grown dramatically. Riboswitches fold into elaborate structures and respond to binding of small metabolites by altering the folding pattern of the surrounding transcript, thereby altering the gene expression programme. Riboswitches that use short-range mechanisms to control transcription attenuation and translation initiation and mediate mRNA cleavage have been characterized in many Gram-positive bacteria. Their action typically relies on alternative RNA structures that are differentially stabilized by the ligand binding. In this issue of Molecular Microbiology, Irnov and Winkler describe a novel Bacillus subtilis riboregulator called EAR that shares structural complexity with riboswitches but possesses a unique mechanism of action. EAR increases expression of exopolysaccharide genes and biofilm formation, and appears to act as a processive, long-range antiterminator, the first such example outside of Escherichia coli. While it is unclear whether EAR senses a biofilm-inducing signal, the results suggest that its action depends on yet unidentified auxiliary factors. Interestingly, efficient capsule biogenesis in E. coli and Bacteroides fragilis also depends on processive antiterminators but utilizes the protein-based mechanisms instead.

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Year:  2010        PMID: 20384681      PMCID: PMC2904953          DOI: 10.1111/j.1365-2958.2010.07133.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  24 in total

1.  Control of intrinsic transcription termination by N and NusA: the basic mechanisms.

Authors:  I Gusarov; E Nudler
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

2.  Modification of the properties of elongating RNA polymerase by persistent association with nascent antiterminator RNA.

Authors:  R Sen; R A King; R A Weisberg
Journal:  Mol Cell       Date:  2001-05       Impact factor: 17.970

3.  The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand.

Authors:  Irina Artsimovitch; Robert Landick
Journal:  Cell       Date:  2002-04-19       Impact factor: 41.582

4.  Functional specialization of transcription elongation factors.

Authors:  Georgiy A Belogurov; Rachel A Mooney; Vladimir Svetlov; Robert Landick; Irina Artsimovitch
Journal:  EMBO J       Date:  2008-12-18       Impact factor: 11.598

Review 5.  Intron-dominated genomes of early ancestors of eukaryotes.

Authors:  Eugene V Koonin
Journal:  J Hered       Date:  2009-07-17       Impact factor: 2.645

6.  Assembly of an RNA-protein complex. Binding of NusB and NusE (S10) proteins to boxA RNA nucleates the formation of the antitermination complex involved in controlling rRNA transcription in Escherichia coli.

Authors:  Sandra J Greive; August F Lins; Peter H von Hippel
Journal:  J Biol Chem       Date:  2005-08-18       Impact factor: 5.157

7.  Inhibition of a transcriptional pause by RNA anchoring to RNA polymerase.

Authors:  Natalia Komissarova; Tatiana Velikodvorskaya; Ranjan Sen; Rodney A King; Sarbani Banik-Maiti; Robert A Weisberg
Journal:  Mol Cell       Date:  2008-09-05       Impact factor: 17.970

8.  A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes.

Authors:  Edmund Loh; Olivier Dussurget; Jonas Gripenland; Karolis Vaitkevicius; Teresa Tiensuu; Pierre Mandin; Francis Repoila; Carmen Buchrieser; Pascale Cossart; Jörgen Johansson
Journal:  Cell       Date:  2009-11-13       Impact factor: 41.582

9.  A family of transcriptional antitermination factors necessary for synthesis of the capsular polysaccharides of Bacteroides fragilis.

Authors:  Maria Chatzidaki-Livanis; Michael J Coyne; Laurie E Comstock
Journal:  J Bacteriol       Date:  2009-10-02       Impact factor: 3.490

Review 10.  The long and the short of riboswitches.

Authors:  Alexander Serganov
Journal:  Curr Opin Struct Biol       Date:  2009-03-19       Impact factor: 6.809

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  2 in total

Review 1.  A Two-Way Street: Regulatory Interplay between RNA Polymerase and Nascent RNA Structure.

Authors:  Jinwei Zhang; Robert Landick
Journal:  Trends Biochem Sci       Date:  2016-01-25       Impact factor: 13.807

Review 2.  What Is in a Cat Scratch? Growth of Bartonella henselae in a Biofilm.

Authors:  Udoka Okaro; Sierra George; Burt Anderson
Journal:  Microorganisms       Date:  2021-04-14
  2 in total

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