Literature DB >> 20382759

Pho85 kinase, a cyclin-dependent kinase, regulates nuclear accumulation of the Rim101 transcription factor in the stress response of Saccharomyces cerevisiae.

Masafumi Nishizawa1, Mirai Tanigawa, Michio Hayashi, Tatsuya Maeda, Yoshiaki Yazaki, Yasushi Saeki, Akio Toh-e.   

Abstract

The budding yeast Saccharomyces cerevisiae alters its gene expression profile in response to changing environmental conditions. The Pho85 kinase, one of the yeast cyclin-dependent kinases (CDK), is known to play an important role in the cellular response to alterations in parameters such as nutrient levels and salinity. Several genes whose expression is regulated, either directly or indirectly, by the Rim101 transcription factor become constitutively activated when Pho85 function is absent. Because Rim101 is responsible for adaptation to alkaline conditions, this observation suggests an interaction between Pho85 and Rim101 in the response to alkaline stress. We have found that Pho85 affects neither RIM101 transcription, the proteolytic processing that is required for Rim101 activation, nor Rim101 stability. Rather, Pho85 regulates the nuclear accumulation of active Rim101, possibly via phosphorylation. Additionally, we report that Pho85 and the transcription factor Pho4 are necessary for adaptation to alkaline conditions and that PTK2 activation by Pho4 is involved in this process. These findings illustrate novel roles for the regulators of the PHO system when yeast cells cope with various environmental stresses potentially threatening their survival.

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Year:  2010        PMID: 20382759      PMCID: PMC2901641          DOI: 10.1128/EC.00247-09

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  38 in total

1.  Ambient pH signaling regulates nuclear localization of the Aspergillus nidulans PacC transcription factor.

Authors:  J M Mingot; E A Espeso; E Díez; M A Peñalva
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

2.  Alkaline response genes of Saccharomyces cerevisiae and their relationship to the RIM101 pathway.

Authors:  T M Lamb; W Xu; A Diamond; A P Mitchell
Journal:  J Biol Chem       Date:  2000-10-24       Impact factor: 5.157

3.  Mouse cyclin-dependent kinase (Cdk) 5 is a functional homologue of a yeast Cdk, pho85 kinase.

Authors:  M Nishizawa; Y Kanaya; A Toh-E
Journal:  J Biol Chem       Date:  1999-11-26       Impact factor: 5.157

4.  Pho85 kinase, a yeast cyclin-dependent kinase, regulates the expression of UGP1 encoding UDP-glucose pyrophosphorylase.

Authors:  M Nishizawa; M Tanabe; N Yabuki; K Kitada; A Toh-E
Journal:  Yeast       Date:  2001-02       Impact factor: 3.239

5.  Regulation of yeast H(+)-ATPase by protein kinases belonging to a family dedicated to activation of plasma membrane transporters.

Authors:  A Goossens; N de La Fuente; J Forment; R Serrano; F Portillo
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

Review 6.  Pho85 and signaling environmental conditions.

Authors:  Adam S Carroll; Erin K O'Shea
Journal:  Trends Biochem Sci       Date:  2002-02       Impact factor: 13.807

Review 7.  Genetic analysis of calmodulin and its targets in Saccharomyces cerevisiae.

Authors:  M S Cyert
Journal:  Annu Rev Genet       Date:  2001       Impact factor: 16.830

8.  Functional profiling of the Saccharomyces cerevisiae genome.

Authors:  Guri Giaever; Angela M Chu; Li Ni; Carla Connelly; Linda Riles; Steeve Véronneau; Sally Dow; Ankuta Lucau-Danila; Keith Anderson; Bruno André; Adam P Arkin; Anna Astromoff; Mohamed El-Bakkoury; Rhonda Bangham; Rocio Benito; Sophie Brachat; Stefano Campanaro; Matt Curtiss; Karen Davis; Adam Deutschbauer; Karl-Dieter Entian; Patrick Flaherty; Francoise Foury; David J Garfinkel; Mark Gerstein; Deanna Gotte; Ulrich Güldener; Johannes H Hegemann; Svenja Hempel; Zelek Herman; Daniel F Jaramillo; Diane E Kelly; Steven L Kelly; Peter Kötter; Darlene LaBonte; David C Lamb; Ning Lan; Hong Liang; Hong Liao; Lucy Liu; Chuanyun Luo; Marc Lussier; Rong Mao; Patrice Menard; Siew Loon Ooi; Jose L Revuelta; Christopher J Roberts; Matthias Rose; Petra Ross-Macdonald; Bart Scherens; Greg Schimmack; Brenda Shafer; Daniel D Shoemaker; Sharon Sookhai-Mahadeo; Reginald K Storms; Jeffrey N Strathern; Giorgio Valle; Marleen Voet; Guido Volckaert; Ching-yun Wang; Teresa R Ward; Julie Wilhelmy; Elizabeth A Winzeler; Yonghong Yang; Grace Yen; Elaine Youngman; Kexin Yu; Howard Bussey; Jef D Boeke; Michael Snyder; Peter Philippsen; Ronald W Davis; Mark Johnston
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

9.  Dissection of a complex phenotype by functional genomics reveals roles for the yeast cyclin-dependent protein kinase Pho85 in stress adaptation and cell integrity.

Authors:  Dongqing Huang; Jason Moffat; Brenda Andrews
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

10.  Nutrient-regulated antisense and intragenic RNAs modulate a signal transduction pathway in yeast.

Authors:  Masafumi Nishizawa; Tae Komai; Yuki Katou; Katsuhiko Shirahige; Takehiko Ito; Akio Toh-E
Journal:  PLoS Biol       Date:  2008-12-23       Impact factor: 8.029

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  10 in total

Review 1.  Pathogenesis of Dermatophytosis: Sensing the Host Tissue.

Authors:  Nilce M Martinez-Rossi; Nalu T A Peres; Antonio Rossi
Journal:  Mycopathologia       Date:  2016-09-02       Impact factor: 2.574

Review 2.  Cyclin dependent protein kinases and stress responses in plants.

Authors:  Georgios Kitsios; John H Doonan
Journal:  Plant Signal Behav       Date:  2011-02-01

3.  Break-seq reveals hydroxyurea-induced chromosome fragility as a result of unscheduled conflict between DNA replication and transcription.

Authors:  Elizabeth A Hoffman; Andrew McCulley; Brian Haarer; Remigiusz Arnak; Wenyi Feng
Journal:  Genome Res       Date:  2015-01-21       Impact factor: 9.043

4.  A trans-acting Variant within the Transcription Factor RIM101 Interacts with Genetic Background to Determine its Regulatory Capacity.

Authors:  Timothy Read; Phillip A Richmond; Robin D Dowell
Journal:  PLoS Genet       Date:  2016-01-11       Impact factor: 5.917

5.  Similar environments but diverse fates: Responses of budding yeast to nutrient deprivation.

Authors:  Saul M Honigberg
Journal:  Microb Cell       Date:  2016-08

Review 6.  Coordinate responses to alkaline pH stress in budding yeast.

Authors:  Albert Serra-Cardona; David Canadell; Joaquín Ariño
Journal:  Microb Cell       Date:  2015-05-22

7.  A phosphatase-centric mechanism drives stress signaling response.

Authors:  David Maria Hollenstein; Gabriela Gérecová; Natalie Romanov; Jessica Ferrari; Jiri Veis; Marion Janschitz; Reinhard Beyer; Christoph Schüller; Egon Ogris; Markus Hartl; Gustav Ammerer; Wolfgang Reiter
Journal:  EMBO Rep       Date:  2021-09-24       Impact factor: 8.807

8.  Identification and Functional Characterisation of CRK12:CYC9, a Novel Cyclin-Dependent Kinase (CDK)-Cyclin Complex in Trypanosoma brucei.

Authors:  Séverine Monnerat; Cristina I Almeida Costa; Andrea C Forkert; Corinna Benz; Alana Hamilton; Laurence Tetley; Richard Burchmore; Carlos Novo; Jeremy C Mottram; Tansy C Hammarton
Journal:  PLoS One       Date:  2013-06-21       Impact factor: 3.240

9.  The PhosphoGRID Saccharomyces cerevisiae protein phosphorylation site database: version 2.0 update.

Authors:  Ivan Sadowski; Bobby-Joe Breitkreutz; Chris Stark; Ting-Cheng Su; Matthew Dahabieh; Sheetal Raithatha; Wendy Bernhard; Rose Oughtred; Kara Dolinski; Kris Barreto; Mike Tyers
Journal:  Database (Oxford)       Date:  2013-05-13       Impact factor: 3.451

10.  Environmental pH modulates transcriptomic responses in the fungus Fusarium sp. associated with KSHB Euwallacea sp. near fornicatus.

Authors:  Diana Sánchez-Rangel; Eric-Edmundo Hernández-Domínguez; Claudia-Anahí Pérez-Torres; Randy Ortiz-Castro; Emanuel Villafán; Benjamín Rodríguez-Haas; Alexandro Alonso-Sánchez; Abel López-Buenfil; Nayeli Carrillo-Ortiz; Lervin Hernández-Ramos; Enrique Ibarra-Laclette
Journal:  BMC Genomics       Date:  2018-10-01       Impact factor: 3.969

  10 in total

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