Literature DB >> 20379956

Using DNA barcoding to identify species within Euphorbiaceae.

Xiaohui Pang1, Jingyuan Song, Yingjie Zhu, Caixiang Xie, Shilin Chen.   

Abstract

In this study, we tested the applicability of four DNA regions (rbcL, matK, ITS, and ITS2) as barcodes for identifying species within Euphorbiaceae. Based on assessments of the specific genetic divergence, the DNA barcoding gap, and the ability for species discrimination, the present results affirmed that ITS/ITS2 is a potential barcode for the Euphorbiaceae species. This study also provided a large-scale test to evaluate the effectiveness of ITS/ITS2 for differentiating species within Euphorbiaceae. Of the 1183 plant samples collected from 871 species in 66 diverse genera, ITS/ITS2 successfully identified > 90% and 100% of them at the species and genus levels, respectively. Therefore, our research indicates that use of the ITS/ITS2 region is a powerful technique for Euphorbiaceae identification. © Georg Thieme Verlag KG Stuttgart · New York.

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Year:  2010        PMID: 20379956     DOI: 10.1055/s-0030-1249806

Source DB:  PubMed          Journal:  Planta Med        ISSN: 0032-0943            Impact factor:   3.352


  26 in total

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5.  Use of ITS2 region as the universal DNA barcode for plants and animals.

Authors:  Hui Yao; Jingyuan Song; Chang Liu; Kun Luo; Jianping Han; Ying Li; Xiaohui Pang; Hongxi Xu; Yingjie Zhu; Peigen Xiao; Shilin Chen
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6.  Application of the ITS2 Region for Barcoding Medicinal Plants of Selaginellaceae in Pteridophyta.

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Review 7.  Choosing and using a plant DNA barcode.

Authors:  Peter M Hollingsworth; Sean W Graham; Damon P Little
Journal:  PLoS One       Date:  2011-05-26       Impact factor: 3.240

8.  DNA barcoding Bromeliaceae: achievements and pitfalls.

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Journal:  PLoS One       Date:  2012-01-05       Impact factor: 3.240

9.  The internal transcribed spacer (ITS) region and trnH-psbA [corrected] are suitable candidate loci for DNA barcoding of tropical tree species of India.

Authors:  Abhinandan Mani Tripathi; Antariksh Tyagi; Anoop Kumar; Akanksha Singh; Shivani Singh; Lal Babu Chaudhary; Sribash Roy
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10.  The short ITS2 sequence serves as an efficient taxonomic sequence tag in comparison with the full-length ITS.

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