| Literature DB >> 20374640 |
Mohamed O Ahmed1, Peter D Clegg, Nicola J Williams, Keith E Baptiste, Malcolm Bennett.
Abstract
BACKGROUND: Escherichia coli isolates of equine faecal origin were investigated for antibiotic resistance, resistance genes and their ability to perform horizontal transfer.Entities:
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Year: 2010 PMID: 20374640 PMCID: PMC2867969 DOI: 10.1186/1476-0711-9-12
Source DB: PubMed Journal: Ann Clin Microbiol Antimicrob ISSN: 1476-0711 Impact factor: 3.944
Details of the primers used for PCR protocols.
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Primer sequences and amplification protocols were taken from the following sources:: TEM & SHV β-lactamase genes [17];catI, catII, catIII [18]; cmlA [19];tetA, tetB, tetC, tetD, tetE and tetG [20];dfrA1, dfrA9 [21];dfrA12, dfrA13, dfrA7, dfrA17 [22]
Resistance profiles and MDR frequency in E. coli isolates from equine faecal samples.
| Abs | No. of faecal samples with at least one resistant | No | Proportion of isolates resistant by disc diffusion method, which were confirmed by MIC | No MDR-positive faecal samples |
|---|---|---|---|---|
| AMP | 89 (33.7%) | 191 | 93.0% | 57 (21.6%) |
| APR | 1 (0.4%) | 1 | - | 1 (0.4%) |
| NAL | 36 (13.6%) | 72 | - | 35 (13.3%) |
| CIP | 28 (10.6%) | 65 | 93.8% | 28 (10.6%) |
| CHL | 49 (18.6%) | 102 | 100% | 47 (17.8%) |
| FLO | 9 (3.4%) | 14 | - | 9 (3.4%) |
| TET | 92 (34.8%) | 198 | 93.4% | 57 (21.6%) |
| TRI | 135 (51.0%) | 279 | 95.0% | 57 (21.6%) |
Abbreviation: ABs, antimicrobials; AMP, ampicillin; APR, apramycin; NAL, nalidixic acid; CIP, ciprofloxacin; CHL, chloramphenicol; FLO, florfenicol; TET, tetracyclin; TRI, trimethoprim
Summary of results showing the identification and distribution of antibiotic resistance genes in E. coli isolates from equine faecal samples taken from hospital and livery premises.
| AMP (191) | Hospital n = 177 | 169 | 8 | |
| CHL (102) | Hospital n = 97 | 75 | 22 | |
| TET (198) | Hospital n = 177 | 154 | 23 | |
| TRI (279) | Hospital n = 209 | 195 | 14 |
All genes listed were tested by PCR amplification using gene-specific primer pairs listed in Table 1. Genes positively identified by PCR are shown in bold, and are listed according to their frequency of occurrence within each resistance group: AMP, TEM lactamase genes 91%, SHV β-lactamase genes 0.6%; CHL, ; TET, ,TRI, , , , . Those genes failed to give rise to detectable levels of PCR product are listed in normal type.
Abbreviations: AMP, ampicillin; CHL, chloramphenicol; TET, tetracycline; TRI, trimethoprim
Resistant isolates that transferred resistance via conjugation, listed according to their resistance phenotypes.
| AMP, CHL, TET, TRI (n = 6) | |
| AMP, TET, TRI (n = 2) | |
Abbreviations: AMP, ampicillin; CHL, chloramphenicol; TET, tetracycline; TRI, trimethoprim; n = number of isolates