Literature DB >> 20373040

Development of bimolecular fluorescence complementation using Dronpa for visualization of protein-protein interactions in cells.

You Ri Lee1, Jong-Hwa Park, Soo-Hyun Hahm, Lin-Woo Kang, Ji Hyung Chung, Ki-Hyun Nam, Kwang Yeon Hwang, Ick Chan Kwon, Ye Sun Han.   

Abstract

PURPOSE: We developed a bimolecular fluorescence complementation (BiFC) strategy using Dronpa, a new fluorescent protein with reversible photoswitching activity and fast responsibility to light, to monitor protein-protein interactions in cells. PROCEDURES: Dronpa was split at residue Glu164 in order to generate two Dronpa fragments [Dronpa N-terminal: DN (Met1-Glu164), Dronpa C-terminal: DC (Gly165-Lys224)]. DN or DC was separately fused with C terminus of hHus1 or N terminus of hRad1. Flexible linker [(GGGGS)×2] was introduced to enhance Dronpa complementation by hHus1-hRad1 interaction. Furthermore, we developed expression vectors to visualize the interaction between hMYH and hHus1. Gene fragments corresponding to the coding regions of hMYH and hHus1 were N-terminally or C-terminally fused with DN and DC coding region.
RESULTS: Complemented Dronpa fluorescence was only observed in HEK293 cells cotransfected with hHus1-LDN and DCL-hRad1 expression vectors, but not with hHus1-LDN or DCL-hRad1 expression vector alone. Western blot analysis of immunoprecipitated samples using anti-c-myc or anti-flag showed that DN-fused hHus1 interacted with DC-fused hRad1. Complemented Dronpa fluorescence was also observed in cells cotransfected with hMYH-LDN and DCL-hHus1 expression vectors or hMYH-LDN and hHus1-LDC expression vectors. Furthermore, complemented Dronpa, induced by the interaction between hMYH-LDN and DCL-hHus1, showed almost identical photoswitching activity as that of native Dronpa.
CONCLUSION: These results demonstrate that BiFC using Dronpa can be successfully used to investigate protein-protein interaction in live cells. Furthermore, the fact that complemented Dronpa has a reversible photoswitching activity suggests that it can be used as a tool for tracking protein-protein interaction.

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Year:  2010        PMID: 20373040     DOI: 10.1007/s11307-010-0312-2

Source DB:  PubMed          Journal:  Mol Imaging Biol        ISSN: 1536-1632            Impact factor:   3.488


  47 in total

1.  Structure-based predictions of Rad1, Rad9, Hus1 and Rad17 participation in sliding clamp and clamp-loading complexes.

Authors:  C Venclovas; M P Thelen
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

2.  Simultaneous visualization of multiple protein interactions in living cells using multicolor fluorescence complementation analysis.

Authors:  Chang-Deng Hu; Tom K Kerppola
Journal:  Nat Biotechnol       Date:  2003-04-14       Impact factor: 54.908

Review 3.  Fluorescent proteins as a toolkit for in vivo imaging.

Authors:  Dmitriy M Chudakov; Sergey Lukyanov; Konstantin A Lukyanov
Journal:  Trends Biotechnol       Date:  2005-11-02       Impact factor: 19.536

4.  Subcellular dynamics of protein kinase A activity visualized by FRET-based reporters.

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Journal:  Biochem Biophys Res Commun       Date:  2006-07-31       Impact factor: 3.575

5.  Phosphorylation of Xenopus Rad1 and Hus1 defines a readout for ATR activation that is independent of Claspin and the Rad9 carboxy terminus.

Authors:  Patrick J Lupardus; Karlene A Cimprich
Journal:  Mol Biol Cell       Date:  2006-01-25       Impact factor: 4.138

6.  Physical and functional interactions between MutY glycosylase homologue (MYH) and checkpoint proteins Rad9-Rad1-Hus1.

Authors:  Guoli Shi; Dau-Yin Chang; Chih-Chien Cheng; Xin Guan; Ceslovas Venclovas; A-Lien Lu
Journal:  Biochem J       Date:  2006-11-15       Impact factor: 3.857

7.  8-hydroxyguanine (7,8-dihydro-8-oxoguanine) DNA glycosylase and AP lyase activities of hOGG1 protein and their substrate specificity.

Authors:  K Shinmura; H Kasai; A Sasaki; H Sugimura; J Yokota
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8.  Use of bimolecular fluorescence complementation in yeast Saccharomyces cerevisiae.

Authors:  Kari-Pekka Skarp; Xueqiang Zhao; Marion Weber; Jussi Jantti
Journal:  Methods Mol Biol       Date:  2008

9.  Complementary methods for studies of protein interactions in living cells.

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Journal:  Nat Methods       Date:  2006-12       Impact factor: 28.547

10.  The human checkpoint sensor Rad9-Rad1-Hus1 interacts with and stimulates NEIL1 glycosylase.

Authors:  Xin Guan; Haibo Bai; Guoli Shi; Corey A Theriot; Tapas K Hazra; Sankar Mitra; A-Lien Lu
Journal:  Nucleic Acids Res       Date:  2007-03-29       Impact factor: 16.971

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  12 in total

Review 1.  Diversity in genetic in vivo methods for protein-protein interaction studies: from the yeast two-hybrid system to the mammalian split-luciferase system.

Authors:  Bram Stynen; Hélène Tournu; Jan Tavernier; Patrick Van Dijck
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

2.  Development of bimolecular fluorescence complementation using rsEGFP2 for detection and super-resolution imaging of protein-protein interactions in live cells.

Authors:  Sheng Wang; Miao Ding; Xuanze Chen; Lei Chang; Yujie Sun
Journal:  Biomed Opt Express       Date:  2017-05-31       Impact factor: 3.732

3.  Protein fragment bimolecular fluorescence complementation analyses for the in vivo study of protein-protein interactions and cellular protein complex localizations.

Authors:  Rainer Waadt; Kathrin Schlücking; Julian I Schroeder; Jörg Kudla
Journal:  Methods Mol Biol       Date:  2014

Review 4.  Bimolecular Fluorescence Complementation (BiFC) Analysis: Advances and Recent Applications for Genome-Wide Interaction Studies.

Authors:  Kristi E Miller; Yeonsoo Kim; Won-Ki Huh; Hay-Oak Park
Journal:  J Mol Biol       Date:  2015-03-12       Impact factor: 5.469

5.  RefSOFI for Mapping Nanoscale Organization of Protein-Protein Interactions in Living Cells.

Authors:  Fabian Hertel; Gary C H Mo; Sam Duwé; Peter Dedecker; Jin Zhang
Journal:  Cell Rep       Date:  2015-12-31       Impact factor: 9.423

6.  A near-infrared BiFC reporter for in vivo imaging of protein-protein interactions.

Authors:  Grigory S Filonov; Vladislav V Verkhusha
Journal:  Chem Biol       Date:  2013-07-25

Review 7.  Surveying the landscape of optogenetic methods for detection of protein-protein interactions.

Authors:  Matthew D Wiens; Robert E Campbell
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2018-01-15

8.  Visualization of protein interactions in living Drosophila embryos by the bimolecular fluorescence complementation assay.

Authors:  Bruno Hudry; Séverine Viala; Yacine Graba; Samir Merabet
Journal:  BMC Biol       Date:  2011-01-28       Impact factor: 7.431

9.  Photoactivated localization microscopy with bimolecular fluorescence complementation (BiFC-PALM) for nanoscale imaging of protein-protein interactions in cells.

Authors:  Andrew Nickerson; Tao Huang; Li-Jung Lin; Xiaolin Nan
Journal:  PLoS One       Date:  2014-06-25       Impact factor: 3.240

10.  Super-resolution imaging and tracking of protein-protein interactions in sub-diffraction cellular space.

Authors:  Zhen Liu; Dong Xing; Qian Peter Su; Yun Zhu; Jiamei Zhang; Xinyu Kong; Boxin Xue; Sheng Wang; Hao Sun; Yile Tao; Yujie Sun
Journal:  Nat Commun       Date:  2014-07-17       Impact factor: 14.919

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