Literature DB >> 20372178

Pup grows up: in vitro characterization of the degradation of pupylated proteins.

Daniel A Kraut1, Andreas Matouschek.   

Abstract

By reconstituting the recently discovered prokaryotic ubiquitin-like protein (Pup)--proteasome degradation system in vitro, Weber-Ban and colleagues (Striebel et al, 2010) elucidate its mechanism and describe a surprising variation on the established principles of protease targeting. Nevertheless, their findings suggest that the bacterial and eukaryotic systems follow the same overall principles even if the details differ.

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Year:  2010        PMID: 20372178      PMCID: PMC2857470          DOI: 10.1038/emboj.2010.40

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  10 in total

1.  An unstructured initiation site is required for efficient proteasome-mediated degradation.

Authors:  Sumit Prakash; Lin Tian; Kevin S Ratliff; Rebecca E Lehotzky; Andreas Matouschek
Journal:  Nat Struct Mol Biol       Date:  2004-08-15       Impact factor: 15.369

2.  A distinct structural region of the prokaryotic ubiquitin-like protein (Pup) is recognized by the N-terminal domain of the proteasomal ATPase Mpa.

Authors:  Markus Sutter; Frank Striebel; Fred F Damberger; Frédéric H-T Allain; Eilika Weber-Ban
Journal:  FEBS Lett       Date:  2009-09-15       Impact factor: 4.124

3.  The mycobacterial Mpa-proteasome unfolds and degrades pupylated substrates by engaging Pup's N-terminus.

Authors:  Frank Striebel; Moritz Hunkeler; Heike Summer; Eilika Weber-Ban
Journal:  EMBO J       Date:  2010-03-04       Impact factor: 11.598

4.  Proteasome sequences in eubacteria.

Authors:  A Lupas; P Zwickl; W Baumeister
Journal:  Trends Biochem Sci       Date:  1994-12       Impact factor: 13.807

5.  Structural insights on the Mycobacterium tuberculosis proteasomal ATPase Mpa.

Authors:  Tao Wang; Hua Li; Gang Lin; Chunyan Tang; Dongyang Li; Carl Nathan; K Heran Darwin; Huilin Li
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

Review 6.  Targeting proteins for degradation.

Authors:  Erin K Schrader; Kristine G Harstad; Andreas Matouschek
Journal:  Nat Chem Biol       Date:  2009-11       Impact factor: 15.040

Review 7.  Recognition and processing of ubiquitin-protein conjugates by the proteasome.

Authors:  Daniel Finley
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

8.  Ubiquitin-like protein involved in the proteasome pathway of Mycobacterium tuberculosis.

Authors:  Michael J Pearce; Julian Mintseris; Jessica Ferreyra; Steven P Gygi; K Heran Darwin
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

9.  Pup, a prokaryotic ubiquitin-like protein, is an intrinsically disordered protein.

Authors:  Shanhui Liao; Qiang Shang; Xuecheng Zhang; Jiahai Zhang; Chao Xu; Xiaoming Tu
Journal:  Biochem J       Date:  2009-08-13       Impact factor: 3.857

Review 10.  ATP-dependent proteases of bacteria: recognition logic and operating principles.

Authors:  Tania A Baker; Robert T Sauer
Journal:  Trends Biochem Sci       Date:  2006-10-30       Impact factor: 13.807

  10 in total
  1 in total

1.  Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs.

Authors:  Md Mehedi Hasan; Yuan Zhou; Xiaotian Lu; Jinyan Li; Jiangning Song; Ziding Zhang
Journal:  PLoS One       Date:  2015-06-16       Impact factor: 3.240

  1 in total

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