Literature DB >> 20370568

Effect of 2, 5-substituents on the stability of cyclic nitrone superoxide spin adducts: A density functional theory approach.

Li-Bo Du1, Lan-Fen Wang, Yang-Ping Liu, Hong-Ying Jia, Yang Liu, Ke-Jian Liu, Qiu Tian.   

Abstract

In the present study, five <span class="Chemical">cyclic nitrone superoxide <span class="Gene">spin adducts, i.e. <span class="Chemical">DMPO-OOH, M(3)PO-OOH, EMPO-OOH, DEPMPO-OOH and DEPDMPO-OOH, were chosen as model compounds to investigate the effect of 2,5-subsitituents on their stability, through structural analysis and decay thermodynamics using density functional theory (DFT) calculations. Analysis of the optimized geometries reveals that none of the previously proposed stabilizing factors, including intramolecular H-bonds, intramolecular non-bonding interactions, bulky steric protection nor the C(2)-N(1) bond distance can be used to clearly explain the effect of 2,5-substituents on the stability of the spin adducts. Subsequent study found that spin densities on the nitroxyl nitrogen and oxygen are well correlated with the half-lives of the spin adducts and consequently are the proper parameters to characterize the effect of 2,5-substituents on their stability. Examination of the decomposition thermodynamics further supports the effect of the substituents on the persistence of cyclic nitrone superoxide spin adducts.

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Year:  2010        PMID: 20370568      PMCID: PMC3074479          DOI: 10.3109/10715761003758130

Source DB:  PubMed          Journal:  Free Radic Res        ISSN: 1029-2470


  30 in total

1.  Superoxide, Hydrogen Peroxide and Hydroxyl Radical in D1/D2/cytochrome b-559 Photosystem II Reaction Center Complex.

Authors:  Ke Liu; Jian Sun; Yu-Guang Song; Bin Liu; Ying-Kai Xu; Shu-Xiao Zhang; Qiu Tian; Yang Liu
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

2.  Superoxide radical anion adduct of 5,5-dimethyl-1-pyrroline N-oxide (DMPO). 2. The thermodynamics of decay and EPR spectral properties.

Authors:  Frederick A Villamena; John K Merle; Christopher M Hadad; Jay L Zweier
Journal:  J Phys Chem A       Date:  2005-07-14       Impact factor: 2.781

3.  Comparative DFT study of the spin trapping of methyl, mercapto, hydroperoxy, superoxide, and nitric oxide radicals by various substituted cyclic nitrones.

Authors:  Frederick A Villamena; Christopher M Hadad; Jay L Zweier
Journal:  J Phys Chem A       Date:  2005-03-03       Impact factor: 2.781

4.  NMR spin trapping: detection of free radical reactions using a phosphorus-containing nitrone spin trap.

Authors:  V Khramtsov; L J Berliner; T L Clanton
Journal:  Magn Reson Med       Date:  1999-08       Impact factor: 4.668

5.  Evaluation of spin trapping agents and trapping conditions for detection of cell-generated reactive oxygen species.

Authors:  Honglian Shi; Graham Timmins; Michael Monske; Andrew Burdick; Balaraman Kalyanaraman; Yang Liu; Jean-Louis Clément; Scott Burchiel; Ke Jian Liu
Journal:  Arch Biochem Biophys       Date:  2005-05-01       Impact factor: 4.013

6.  2-ethoxycarbonyl-2-methyl-3,4-dihydro-2H-pyrrole-1-oxide: evaluation of the spin trapping properties.

Authors:  G Olive; A Mercier; F Le Moigne; A Rockenbauer; P Tordo
Journal:  Free Radic Biol Med       Date:  2000-02-01       Impact factor: 7.376

7.  Spin trapping of superoxide, alkyl- and lipid-derived radicals with derivatives of the spin trap EPPN.

Authors:  Klaus Stolze; Natascha Udilova; Thomas Rosenau; Andreas Hofinger; Hans Nohl
Journal:  Biochem Pharmacol       Date:  2003-11-01       Impact factor: 5.858

8.  Comparative investigation of superoxide trapping by cyclic nitrone spin traps: the use of singular value decomposition and multiple linear regression analysis.

Authors:  Agnes Keszler; B Kalyanaraman; Neil Hogg
Journal:  Free Radic Biol Med       Date:  2003-11-01       Impact factor: 7.376

9.  Production of hydroxyl radical by decomposition of superoxide spin-trapped adducts.

Authors:  E Finkelstein; G M Rosen; E J Rauckman
Journal:  Mol Pharmacol       Date:  1982-03       Impact factor: 4.436

10.  Theoretical study of the spin trapping of hydroxyl radical by cyclic nitrones: a density functional theory approach.

Authors:  Frederick A Villamena; Christopher M Hadad; Jay L Zweier
Journal:  J Am Chem Soc       Date:  2004-02-18       Impact factor: 15.419

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