Literature DB >> 20369869

Multishell structures of virus coat proteins.

Peter Prinsen1, Paul van der Schoot, William M Gelbart, Charles M Knobler.   

Abstract

Under conditions of low ionic strength and a pH ranging between about 3.7 and 5.0, solutions of purified coat proteins of cowpea chlorotic mottle virus (CCMV) form spherical multishell structures in the absence of viral RNA. The outer surfaces of the shells in these structures are negatively charged, whereas the inner surfaces are positively charged due to a disordered cationic N-terminal domain of the capsid protein, the arginine-rich RNA-binding motif that protrudes into the interior. We show that the main forces stabilizing these multishells are counterion release combined with a lower charge density in the RNA-binding motif region of the outer shells due to their larger radii of curvature, arguing that these compensate for the outer shells not being able to adopt the smaller, optimal, radius of curvature of the inner shell. This explains why the structures are only stable at low ionic strengths at pHs for which the outer surface is negatively charged and why the larger outer shells are not observed separately in solution. We show how to calculate the free energy of shells of nonoptimal radius of curvature from the elastic properties of the native shell. The spacing between shells is determined mainly by the entropic elasticity of the RNA-binding motifs. Although we focus on CCMV multishells, we also predict the solution conditions under which multishells formed by CCMV coat protein mutants with a lower RNA-binding motif charge are stable, and we examine other viruses as well. We conclude that at a given surface charge density, the boundaries separating regions of stable multishells with different numbers of shells shift to lower ionic strengths upon either increasing the length of the RNA-binding motif, increasing the stiffness of the shells, or decreasing the charge per RNA-binding motif.

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Year:  2010        PMID: 20369869     DOI: 10.1021/jp911040z

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  12 in total

1.  Self-assembly of viral capsid protein and RNA molecules of different sizes: requirement for a specific high protein/RNA mass ratio.

Authors:  Ruben D Cadena-Nava; Mauricio Comas-Garcia; Rees F Garmann; A L N Rao; Charles M Knobler; William M Gelbart
Journal:  J Virol       Date:  2011-12-28       Impact factor: 5.103

2.  The role of solution conditions in the bacteriophage PP7 capsid charge regulation.

Authors:  Rikkert J Nap; Anže Lošdorfer Božič; Igal Szleifer; Rudolf Podgornik
Journal:  Biophys J       Date:  2014-10-21       Impact factor: 4.033

3.  Hepatitis virus capsid polymorph stability depends on encapsulated cargo size.

Authors:  Li He; Zachary Porterfield; Paul van der Schoot; Adam Zlotnick; Bogdan Dragnea
Journal:  ACS Nano       Date:  2013-09-30       Impact factor: 15.881

4.  How simple can a model of an empty viral capsid be? Charge distributions in viral capsids.

Authors:  Anže Lošdorfer Božič; Antonio Siber; Rudolf Podgornik
Journal:  J Biol Phys       Date:  2012-09-06       Impact factor: 1.365

5.  RNA Homopolymers Form Higher-Curvature Virus-like Particles Than Do Normal-Composition RNAs.

Authors:  Abby R Thurm; Christian Beren; Ana Luisa Duran-Meza; Charles M Knobler; William M Gelbart
Journal:  Biophys J       Date:  2019-08-16       Impact factor: 4.033

6.  Role of electrostatics in the assembly pathway of a single-stranded RNA virus.

Authors:  Rees F Garmann; Mauricio Comas-Garcia; Melissa S T Koay; Jeroen J L M Cornelissen; Charles M Knobler; William M Gelbart
Journal:  J Virol       Date:  2014-06-25       Impact factor: 5.103

7.  Rab11 and Lysotracker Markers Reveal Correlation between Endosomal Pathways and Transfection Efficiency of Surface-Functionalized Cationic Liposome-DNA Nanoparticles.

Authors:  Ramsey N Majzoub; Emily Wonder; Kai K Ewert; Venkata Ramana Kotamraju; Tambet Teesalu; Cyrus R Safinya
Journal:  J Phys Chem B       Date:  2016-06-03       Impact factor: 2.991

8.  Impact of the topology of viral RNAs on their encapsulation by virus coat proteins.

Authors:  Paul van der Schoot; Roya Zandi
Journal:  J Biol Phys       Date:  2013-03-14       Impact factor: 1.365

9.  In vitro assembly of the Rous Sarcoma Virus capsid protein into hexamer tubes at physiological temperature.

Authors:  Soumeya A Jaballah; Graham D Bailey; Ambroise Desfosses; Jaekyung Hyun; Alok K Mitra; Richard L Kingston
Journal:  Sci Rep       Date:  2017-06-06       Impact factor: 4.379

10.  The 3.3 Å structure of a plant geminivirus using cryo-EM.

Authors:  Emma L Hesketh; Keith Saunders; Chloe Fisher; Joran Potze; John Stanley; George P Lomonossoff; Neil A Ranson
Journal:  Nat Commun       Date:  2018-06-18       Impact factor: 14.919

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