Literature DB >> 20361796

Design of an encodable tyrosine kinase-inducible domain: detection of tyrosine kinase activity by terbium luminescence.

Susan Carr Zondlo1, Feng Gao, Neal J Zondlo.   

Abstract

Tyrosine kinases are critical mediators of intracellular signaling and of intracellular responses to extracellular signaling. Changes in tyrosine kinase activity are implicated in numerous human diseases, including cancers, diabetes, and pathogen infectivity. To address questions in tyrosine phosphorylation, we have designed a protein tyrosine kinase-inducible domain, a small, genetically encodable protein motif whose structure is dependent on its tyrosine phosphorylation state. Tyrosine kinase-inducible domain peptides are based on EF-hand loops in which a structurally critical Glu12 residue is replaced by tyrosine at residue 11 or at residue 15 of the protein. Tyrosine kinase-inducible domain peptides bind terbium(III) in a phosphorylation-dependent manner, showing strong terbium luminescence when phosphorylated but weak terbium luminescence when not phosphorylated. Lanthanide binding was confirmed by NMR. A tyrosine kinase-inducible domain peptide, pKID-Abl, was designed to incorporate a recognition sequence of the Abl kinase. Incubation of pKID-Abl with Abl kinase resulted in a large increase in terbium luminescence. This increase in luminescence was abolished when pKID-Abl and Abl kinase were incubated with the Abl kinase inhibitor Gleevec. In addition, incubation of phosphorylated pKID-Abl with the tyrosine phosphatase YOP resulted in a large reduction in terbium luminescence. pKID-Abl was employed as a fluorescent sensor of Abl tyrosine kinase activity in HeLa cell extracts, exhibiting low luminescence with extracts from serum-starved cells and increased luminescence using extracts from EGF-treated cells. These results indicate that tyrosine kinase-inducible domains may be used as sensors of tyrosine kinase and tyrosine phosphatase activity and in the detection of tyrosine kinase inhibitors.

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Year:  2010        PMID: 20361796     DOI: 10.1021/ja100862u

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  26 in total

1.  Redox-Responsive Protein Design: Design of a Small Protein Motif Dependent on Glutathionylation.

Authors:  Michael J Scheuermann; Christina R Forbes; Neal J Zondlo
Journal:  Biochemistry       Date:  2018-12-13       Impact factor: 3.162

2.  Photocleavable peptide-oligonucleotide conjugates for protein kinase assays by MALDI-TOF MS.

Authors:  Guangchang Zhou; Faraz Khan; Qing Dai; Juliesta E Sylvester; Stephen J Kron
Journal:  Mol Biosyst       Date:  2012-07-06

3.  Time-resolved luminescence detection of spleen tyrosine kinase activity through terbium sensitization.

Authors:  Andrew M Lipchik; Laurie L Parker
Journal:  Anal Chem       Date:  2013-02-15       Impact factor: 6.986

4.  Reprogramming EF-hands for design of catalytically amplified lanthanide sensors.

Authors:  Korrie L Mack; Olesia V Moroz; Yurii S Moroz; Alissa B Olsen; Jaclyn M McLaughlin; Ivan V Korendovych
Journal:  J Biol Inorg Chem       Date:  2013-02-19       Impact factor: 3.358

5.  Phosphorylation-dependent protein design: design of a minimal protein kinase-inducible domain.

Authors:  Feng Gao; Blair S Thornley; Caitlin M Tressler; Devan Naduthambi; Neal J Zondlo
Journal:  Org Biomol Chem       Date:  2019-04-17       Impact factor: 3.876

6.  KINATEST-ID: a pipeline to develop phosphorylation-dependent terbium sensitizing kinase assays.

Authors:  Andrew M Lipchik; Minervo Perez; Scott Bolton; Vasin Dumrongprechachan; Steven B Ouellette; Wei Cui; Laurie L Parker
Journal:  J Am Chem Soc       Date:  2015-02-17       Impact factor: 15.419

7.  Design of a Protein Motif Responsive to Tyrosine Nitration and an Encoded Turn-Off Sensor of Tyrosine Nitration.

Authors:  Andrew R Urmey; Neal J Zondlo
Journal:  Biochemistry       Date:  2019-06-12       Impact factor: 3.162

8.  Photocleavable peptide-conjugated magnetic beads for protein kinase assays by MALDI-TOF MS.

Authors:  Guangchang Zhou; Xiaoliang Yan; Ding Wu; Stephen J Kron
Journal:  Bioconjug Chem       Date:  2010-10-20       Impact factor: 4.774

9.  Proline editing: a general and practical approach to the synthesis of functionally and structurally diverse peptides. Analysis of steric versus stereoelectronic effects of 4-substituted prolines on conformation within peptides.

Authors:  Anil K Pandey; Devan Naduthambi; Krista M Thomas; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

10.  Recognition of proximally phosphorylated tyrosine residues and continuous analysis of phosphatase activity using a stable europium complex.

Authors:  Sarah H Hewitt; Roanna Liu; Stephen J Butler
Journal:  Supramol Chem       Date:  2017-11-30       Impact factor: 1.688

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