Literature DB >> 20356891

Temporal genetic change in the last remaining population of woolly mammoth.

Veronica Nyström1, Love Dalén, Sergey Vartanyan, Kerstin Lidén, Nils Ryman, Anders Angerbjörn.   

Abstract

During the Late Pleistocene, the woolly mammoth (Mammuthus primigenius) experienced a series of local extinctions generally attributed to human predation or environmental change. Some small and isolated populations did however survive far into the Holocene. Here, we investigated the genetic consequences of the isolation of the last remaining mammoth population on Wrangel Island. We analysed 741 bp of the mitochondrial DNA and found a loss of genetic variation in relation to the isolation event, probably caused by a demographic bottleneck or a founder event. However, in spite of ca 5000 years of isolation, we did not detect any further loss of genetic variation. Together with the relatively high number of mitochondrial haplotypes on Wrangel Island near the final disappearance, this suggests a sudden extinction of a rather stable population.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20356891      PMCID: PMC2894910          DOI: 10.1098/rspb.2010.0301

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  15 in total

1.  EASYPOP (version 1.7): a computer program for population genetics simulations.

Authors:  F Balloux
Journal:  J Hered       Date:  2001 May-Jun       Impact factor: 2.645

Review 2.  Ancient DNA.

Authors:  M Hofreiter; D Serre; H N Poinar; M Kuch; S Pääbo
Journal:  Nat Rev Genet       Date:  2001-05       Impact factor: 53.242

3.  Technical note: improved DNA extraction from ancient bones using silica-based spin columns.

Authors:  D Y Yang; B Eng; J S Waye; J C Dudar; S R Saunders
Journal:  Am J Phys Anthropol       Date:  1998-04       Impact factor: 2.868

Review 4.  Assessing the causes of late Pleistocene extinctions on the continents.

Authors:  Anthony D Barnosky; Paul L Koch; Robert S Feranec; Scott L Wing; Alan B Shabel
Journal:  Science       Date:  2004-10-01       Impact factor: 47.728

5.  Radiocarbon evidence of mid-Holocene mammoths stranded on an Alaskan Bering Sea island.

Authors:  R Dale Guthrie
Journal:  Nature       Date:  2004-06-17       Impact factor: 49.962

6.  The protracted Holocene extinction of California's flightless sea duck (Chendytes lawi) and its implications for the Pleistocene overkill hypothesis.

Authors:  T L Jones; J F Porcasi; J M Erlandson; H Dallas; T A Wake; R Schwaderer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-11       Impact factor: 11.205

7.  Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes.

Authors:  M Thomas P Gilbert; Daniela I Drautz; Arthur M Lesk; Simon Y W Ho; Ji Qi; Aakrosh Ratan; Chih-Hao Hsu; Andrei Sher; Love Dalén; Anders Götherström; Lynn P Tomsho; Snjezana Rendulic; Michael Packard; Paula F Campos; Tatyana V Kuznetsova; Fyodor Shidlovskiy; Alexei Tikhonov; Eske Willerslev; Paola Iacumin; Bernard Buigues; Per G P Ericson; Mietje Germonpré; Pavel Kosintsev; Vladimir Nikolaev; Malgosia Nowak-Kemp; James R Knight; Gerard P Irzyk; Clotilde S Perbost; Karin M Fredrikson; Timothy T Harkins; Sharon Sheridan; Webb Miller; Stephan C Schuster
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-09       Impact factor: 11.205

8.  Genetic structure and extinction of the woolly mammoth, Mammuthus primigenius.

Authors:  Ian Barnes; Beth Shapiro; Adrian Lister; Tatiana Kuznetsova; Andrei Sher; Dale Guthrie; Mark G Thomas
Journal:  Curr Biol       Date:  2007-06-07       Impact factor: 10.834

9.  Arlequin (version 3.0): an integrated software package for population genetics data analysis.

Authors:  Laurent Excoffier; Guillaume Laval; Stefan Schneider
Journal:  Evol Bioinform Online       Date:  2007-02-23       Impact factor: 1.625

10.  Complete mitochondrial genome and phylogeny of Pleistocene mammoth Mammuthus primigenius.

Authors:  Evgeny I Rogaev; Yuri K Moliaka; Boris A Malyarchuk; Fyodor A Kondrashov; Miroslava V Derenko; Ilya Chumakov; Anastasia P Grigorenko
Journal:  PLoS Biol       Date:  2006-02-07       Impact factor: 8.029

View more
  12 in total

1.  Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths.

Authors:  Jacob Enk; Alison Devault; Regis Debruyne; Christine E King; Todd Treangen; Dennis O'Rourke; Steven L Salzberg; Daniel Fisher; Ross MacPhee; Hendrik Poinar
Journal:  Genome Biol       Date:  2011-05-31       Impact factor: 13.583

2.  Complete genomes reveal signatures of demographic and genetic declines in the woolly mammoth.

Authors:  Eleftheria Palkopoulou; Swapan Mallick; Pontus Skoglund; Jacob Enk; Nadin Rohland; Heng Li; Ayça Omrak; Sergey Vartanyan; Hendrik Poinar; Anders Götherström; David Reich; Love Dalén
Journal:  Curr Biol       Date:  2015-04-23       Impact factor: 10.834

3.  Pattern of extinction of the woolly mammoth in Beringia.

Authors:  G M MacDonald; D W Beilman; Y V Kuzmin; L A Orlova; K V Kremenetski; B Shapiro; R K Wayne; B Van Valkenburgh
Journal:  Nat Commun       Date:  2012-06-12       Impact factor: 14.919

4.  Temporal fluctuation in North East Baltic Sea region cattle population revealed by mitochondrial and Y-chromosomal DNA analyses.

Authors:  Marianna Niemi; Auli Bläuer; Terhi Iso-Touru; Janne Harjula; Veronica Nyström Edmark; Eve Rannamäe; Lembi Lõugas; Antti Sajantila; Kerstin Lidén; Jussi-Pekka Taavitsainen
Journal:  PLoS One       Date:  2015-05-20       Impact factor: 3.240

5.  Holarctic genetic structure and range dynamics in the woolly mammoth.

Authors:  Eleftheria Palkopoulou; Love Dalén; Adrian M Lister; Sergey Vartanyan; Mikhail Sablin; Andrei Sher; Veronica Nyström Edmark; Mikael D Brandström; Mietje Germonpré; Ian Barnes; Jessica A Thomas
Journal:  Proc Biol Sci       Date:  2013-09-11       Impact factor: 5.349

6.  Differences in speciation progress in feather mites (Analgoidea) inhabiting the same host: the case of Zachvatkinia and Alloptes living on arctic and long-tailed skuas.

Authors:  Miroslawa Dabert; Stephen J Coulson; Dariusz J Gwiazdowicz; Børge Moe; Sveinn Are Hanssen; Elisabeth M Biersma; Hanne E Pilskog; Jacek Dabert
Journal:  Exp Appl Acarol       Date:  2014-10-24       Impact factor: 2.132

7.  Mitochondrial DNA and Y-chromosomal diversity in ancient populations of domestic sheep (Ovis aries) in Finland: comparison with contemporary sheep breeds.

Authors:  Marianna Niemi; Auli Bläuer; Terhi Iso-Touru; Veronica Nyström; Janne Harjula; Jussi-Pekka Taavitsainen; Jan Storå; Kerstin Lidén; Juha Kantanen
Journal:  Genet Sel Evol       Date:  2013-01-22       Impact factor: 4.297

8.  High potential for using DNA from ancient herring bones to inform modern fisheries management and conservation.

Authors:  Camilla F Speller; Lorenz Hauser; Dana Lepofsky; Jason Moore; Antonia T Rodrigues; Madonna L Moss; Iain McKechnie; Dongya Y Yang
Journal:  PLoS One       Date:  2012-11-30       Impact factor: 3.240

9.  Investigating population history using temporal genetic differentiation.

Authors:  Pontus Skoglund; Per Sjödin; Tobias Skoglund; Martin Lascoux; Mattias Jakobsson
Journal:  Mol Biol Evol       Date:  2014-06-17       Impact factor: 16.240

10.  Changes in variation at the MHC class II DQA locus during the final demise of the woolly mammoth.

Authors:  Patrícia Pečnerová; David Díez-Del-Molino; Sergey Vartanyan; Love Dalén
Journal:  Sci Rep       Date:  2016-05-04       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.