Literature DB >> 20355952

Interplay of sequence, conformation, and binding at the Peptide-titania interface as mediated by water.

Adam A Skelton1, Taining Liang, Tiffany R Walsh.   

Abstract

The initial stages of the adsorption of a hexapeptide at the aqueous titania interface are modeled using atomistic molecular dynamics simulations. This hexapeptide has been identified by experiment [Sano, K. I.; Shiba, K. J. Am. Chem. Soc. 2003, 125, 14234] to bind to Ti particles. We explore the current hypothesis presented by these authors that binding at this peptide-titania interface is the result of electrostatic interactions and find that contact with the surface appears to take place via a pair of oppositely charged groups in the peptide. Our data indicate that the peptide may initially recognize the water layers at the interface, not the titania surface itself, via these charged groups. We also report results of simulations for hexapeptide sequences with selected single-point mutations for alanine and compare these behaviors with those suggested from observed binding affinities from existing alanine scan experiments. Our results indicate that factors in addition to electrostatics also contribute, with the structural rigidity conferred by proline suggested to play a significant role. Finally, our findings suggest that intrapeptide interaction may provide mechanisms for surface detachment that could be detrimental to binding at the interface.

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Year:  2009        PMID: 20355952     DOI: 10.1021/am9001666

Source DB:  PubMed          Journal:  ACS Appl Mater Interfaces        ISSN: 1944-8244            Impact factor:   9.229


  14 in total

1.  Effect of solid surface charge on the binding behaviour of a metal-binding peptide.

Authors:  Senem Donatan; Mehmet Sarikaya; Candan Tamerler; Mustafa Urgen
Journal:  J R Soc Interface       Date:  2012-04-04       Impact factor: 4.118

2.  A review of protein adsorption on bioceramics.

Authors:  Kefeng Wang; Changchun Zhou; Youliang Hong; Xingdong Zhang
Journal:  Interface Focus       Date:  2012-03-22       Impact factor: 3.906

3.  Interplay between adsorbed peptide structure, trapped water, and surface hydrophobicity.

Authors:  Katherine D Krause; Sandra Roy; Dennis K Hore
Journal:  Biointerphases       Date:  2017-05-15       Impact factor: 2.456

4.  Molecular dynamics simulation and conformational analysis of some catalytically active peptides.

Authors:  Bahareh Honarparvar; Adam A Skelton
Journal:  J Mol Model       Date:  2015-04-01       Impact factor: 1.810

5.  Impact of Glutamate Carboxylation in the Adsorption of the α-1 Domain of Osteocalcin to Hydroxyapatite and Titania.

Authors:  Sarah Alamdari; Jim Pfaendtner
Journal:  Mol Syst Des Eng       Date:  2019-12-09

6.  Tuning conformation and properties of peptidomimetic backbones through dual N/Cα-substitution.

Authors:  R Kaminker; I Kaminker; W R Gutekunst; Y Luo; S Lee; J Niu; S Han; C J Hawker
Journal:  Chem Commun (Camb)       Date:  2018-05-17       Impact factor: 6.222

Review 7.  The "autothixotropic" phenomenon of water and its role in proton transfer.

Authors:  Nada Verdel; Igor Jerman; Peter Bukovec
Journal:  Int J Mol Sci       Date:  2011-10-31       Impact factor: 5.923

8.  Facet-specific assembly of proteins on SrTiO₃ polyhedral nanocrystals.

Authors:  Lingqing Dong; Qi Luo; Kui Cheng; Hui Shi; Qi Wang; Wenjian Weng; Wei-Qiang Han
Journal:  Sci Rep       Date:  2014-05-28       Impact factor: 4.379

9.  An In Silico study of TiO2 nanoparticles interaction with twenty standard amino acids in aqueous solution.

Authors:  Shengtang Liu; Xuan-Yu Meng; Jose Manuel Perez-Aguilar; Ruhong Zhou
Journal:  Sci Rep       Date:  2016-11-24       Impact factor: 4.379

10.  Studies of Dynamic Binding of Amino Acids to TiO2 Nanoparticle Surfaces by Solution NMR and Molecular Dynamics Simulations.

Authors:  Mengjun Xue; Janani Sampath; Rachel N Gebhart; Havard J Haugen; S Petter Lyngstadaas; Jim Pfaendtner; Gary Drobny
Journal:  Langmuir       Date:  2020-08-26       Impact factor: 4.331

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