Literature DB >> 20355720

Comprehensive LC-MS E lipidomic analysis using a shotgun approach and its application to biomarker detection and identification in osteoarthritis patients.

Jose M Castro-Perez1, Jurre Kamphorst, Jeroen DeGroot, Floris Lafeber, Jeff Goshawk, Kate Yu, John P Shockcor, Rob J Vreeken, Thomas Hankemeier.   

Abstract

A fast and robust method for lipid profiling utilizing liquid chromatography coupled with mass spectrometry has been demonstrated and validated for the analysis of human plasma. This method allowed quantification and identification of lipids in human plasma using parallel alternating low energy and high energy collision spectral acquisition modes. A total of 275 [corrected] lipids were identified and quantified (as relative concentrations) in both positive and negative ion electrospray ionization mode. The method was validated with five nonendogenous lipids, and the linearity (r(2) better than 0.994) and the intraday and interday repeatability (relative standard deviation, 4-6% and 5-8%, respectively) were satisfactory. The developed lipid profiling method was successfully applied for the analysis of plasma from osteoarthritis (OA) patients. The multivariate statistical analysis by partial least-squares-discrimination analysis suggested an altered lipid metabolism associated with osteoarthritis and the release of arachidonic acid from phospholipids.

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Year:  2010        PMID: 20355720     DOI: 10.1021/pr901094j

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  59 in total

1.  Lipidomics profiling by high-resolution LC-MS and high-energy collisional dissociation fragmentation: focus on characterization of mitochondrial cardiolipins and monolysocardiolipins.

Authors:  Susan S Bird; Vasant R Marur; Matthew J Sniatynski; Heather K Greenberg; Bruce S Kristal
Journal:  Anal Chem       Date:  2010-12-30       Impact factor: 6.986

2.  Checkpoints for Preliminary Identification of Small Molecules found Enriched in Autophagosomes and Activated Mast Cell Secretions Analyzed by Comparative UPLC/MSe.

Authors:  Chad P Satori; Marzieh Ramezani; Joseph S Koopmeiners; Audrey F Meyer; Jose A Rodriguez-Navarro; Michelle M Kuhns; Thane H Taylor; Christy L Haynes; Joseph J Dalluge; Edgar A Arriaga
Journal:  Anal Methods       Date:  2016-10-11       Impact factor: 2.896

3.  An engineered mutant of a host phospholipid synthesis gene inhibits viral replication without compromising host fitness.

Authors:  Guijuan He; Zhenlu Zhang; Preethi Sathanantham; Xin Zhang; Zujian Wu; Lianhui Xie; Xiaofeng Wang
Journal:  J Biol Chem       Date:  2019-07-30       Impact factor: 5.157

4.  Design and application of a data-independent precursor and product ion repository.

Authors:  Konstantinos Thalassinos; Johannes P C Vissers; Stefan Tenzer; Yishai Levin; J Will Thompson; David Daniel; Darrin Mann; Mark R DeLong; M Arthur Moseley; Antoine H America; Andrew K Ottens; Greg S Cavey; Georgios Efstathiou; James H Scrivens; James I Langridge; Scott J Geromanos
Journal:  J Am Soc Mass Spectrom       Date:  2012-07-31       Impact factor: 3.109

5.  Characterization of alanine to valine sequence variants in the Fc region of nivolumab biosimilar produced in Chinese hamster ovary cells.

Authors:  Yantao Li; Tuo Fu; Tao Liu; Huaizu Guo; Qingcheng Guo; Jin Xu; Dapeng Zhang; Weizhu Qian; Jianxin Dai; Bohua Li; Yajun Guo; Sheng Hou; Hao Wang
Journal:  MAbs       Date:  2016-04-06       Impact factor: 5.857

Review 6.  Metabolomics of osteoarthritis: emerging novel markers and their potential clinical utility.

Authors:  Guangju Zhai; Edward W Randell; Proton Rahman
Journal:  Rheumatology (Oxford)       Date:  2018-12-01       Impact factor: 7.580

7.  The use of stable-isotopically labeled oleic acid to interrogate lipid assembly in vivo: assessing pharmacological effects in preclinical species.

Authors:  David G McLaren; Timothy He; Sheng-Ping Wang; Vivienne Mendoza; Raymond Rosa; Karen Gagen; Gowri Bhat; Kithsiri Herath; Paul L Miller; Sloan Stribling; Andrew Taggart; Jason Imbriglio; Jinqi Liu; Dunlu Chen; Shirly Pinto; James M Balkovec; Robert J Devita; Donald J Marsh; Jose M Castro-Perez; Alison Strack; Douglas G Johns; Stephen F Previs; Brian K Hubbard; Thomas P Roddy
Journal:  J Lipid Res       Date:  2011-03-17       Impact factor: 5.922

8.  Versatile characterization of glycosylation modification in CTLA4-Ig fusion proteins by liquid chromatography-mass spectrometry.

Authors:  Lei Zhu; Qingcheng Guo; Huaizu Guo; Tao Liu; Yingxin Zheng; Peiming Gu; Xi Chen; Hao Wang; Sheng Hou; Yajun Guo
Journal:  MAbs       Date:  2014       Impact factor: 5.857

9.  Characterization of complex lipid mixtures in contaminant exposed JEG-3 cells using liquid chromatography and high-resolution mass spectrometry.

Authors:  Eva Gorrochategui; Josefina Casas; Elisabet Pérez-Albaladejo; Olga Jáuregui; Cinta Porte; Sílvia Lacorte
Journal:  Environ Sci Pollut Res Int       Date:  2014-06-28       Impact factor: 4.223

Review 10.  Selection of internal standards for accurate quantification of complex lipid species in biological extracts by electrospray ionization mass spectrometry-What, how and why?

Authors:  Miao Wang; Chunyan Wang; Xianlin Han
Journal:  Mass Spectrom Rev       Date:  2016-01-15       Impact factor: 10.946

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