Literature DB >> 20354773

A resonance Raman band assignable to the O-O stretching mode in the resting oxidized state of bovine heart cytochrome c oxidase.

Miyuki Sakaguchi1, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Takashi Ogura.   

Abstract

In the resting oxidized state (the fully oxidized "as-isolated" state) of cytochrome c oxidase (CcO) preparation, a resonance Raman band is observed at 755 cm(-1) upon 647.1 nm excitation in resonance with an absorption band at 655 nm. Addition of cyanide eliminates the Raman band concomitant with loss of the absorption band at 655 nm. These results strongly suggest that the Raman band at 755 cm(-1) originates from the O-O stretching mode of the bridging peroxide (Fe-O(-)-O(-)-Cu) in the O(2) reduction site of the fully oxidized "as-isolated" CcO. Although the peroxide bridged structure has been proposed on the basis of X-ray crystallography and reductive titration experiments, the present vibrational spectroscopic analyses reveal conclusively the chemical nature of the bridging ligand at the O(2) reduction site of the fully oxidized "as-isolated" bovine heart CcO.

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Year:  2010        PMID: 20354773     DOI: 10.1007/s10863-010-9282-y

Source DB:  PubMed          Journal:  J Bioenerg Biomembr        ISSN: 0145-479X            Impact factor:   2.945


  12 in total

1.  The catalytic cycle of cytochrome c oxidase is not the sum of its two halves.

Authors:  Dmitry Bloch; Ilya Belevich; Audrius Jasaitis; Camilla Ribacka; Anne Puustinen; Michael I Verkhovsky; Mårten Wikström
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-29       Impact factor: 11.205

Review 2.  Synthetic models for heme-copper oxidases.

Authors:  Eunsuk Kim; Eduardo E Chufán; Kaliappan Kamaraj; Kenneth D Karlin
Journal:  Chem Rev       Date:  2004-02       Impact factor: 60.622

3.  Time dependence of the catalytic intermediates in cytochrome c oxidase.

Authors:  S Han; S Takahashi; D L Rousseau
Journal:  J Biol Chem       Date:  2000-01-21       Impact factor: 5.157

4.  An infrared study of CO binding to heart cytochrome c oxidase and hemoglobin A. Implications re O2 reactions.

Authors:  S Yoshikawa; M G Choc; M C O'Toole; W S Caughey
Journal:  J Biol Chem       Date:  1977-08-10       Impact factor: 5.157

5.  Resonance Raman study on photoreduction of cytochrome c oxidase: distinction of cytochromes a and a3 in the intermediate oxidation states.

Authors:  T Ogura; S Yoshikawa; T Kitagawa
Journal:  Biochemistry       Date:  1985-12-17       Impact factor: 3.162

6.  Studies of the heme components of cytochrome c oxidase by EPR spectroscopy.

Authors:  B F Van Gelder; H Beinert
Journal:  Biochim Biophys Acta       Date:  1969-09-16

7.  Quantitative reevaluation of the redox active sites of crystalline bovine heart cytochrome c oxidase.

Authors:  M Mochizuki; H Aoyama; K Shinzawa-Itoh; T Usui; T Tsukihara; S Yoshikawa
Journal:  J Biol Chem       Date:  1999-11-19       Impact factor: 5.157

8.  Variable character of O-O and M-O bonding in side-on (eta(2)) 1:1 metal complexes of O2.

Authors:  Christopher J Cramer; William B Tolman; Klaus H Theopold; Arnold L Rheingold
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-12       Impact factor: 11.205

9.  The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.

Authors:  T Tsukihara; H Aoyama; E Yamashita; T Tomizaki; H Yamaguchi; K Shinzawa-Itoh; R Nakashima; R Yaono; S Yoshikawa
Journal:  Science       Date:  1996-05-24       Impact factor: 47.728

10.  A peroxide bridge between Fe and Cu ions in the O2 reduction site of fully oxidized cytochrome c oxidase could suppress the proton pump.

Authors:  Hiroshi Aoyama; Kazumasa Muramoto; Kyoko Shinzawa-Itoh; Kunio Hirata; Eiki Yamashita; Tomitake Tsukihara; Takashi Ogura; Shinya Yoshikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-21       Impact factor: 11.205

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  10 in total

1.  Electrocatalytic O2-Reduction by Synthetic Cytochrome c Oxidase Mimics: Identification of a "Bridging Peroxo" Intermediate Involved in Facile 4e(-)/4H(+) O2-Reduction.

Authors:  Sudipta Chatterjee; Kushal Sengupta; Shabnam Hematian; Kenneth D Karlin; Abhishek Dey
Journal:  J Am Chem Soc       Date:  2015-09-30       Impact factor: 15.419

2.  Determination of damage-free crystal structure of an X-ray-sensitive protein using an XFEL.

Authors:  Kunio Hirata; Kyoko Shinzawa-Itoh; Naomine Yano; Shuhei Takemura; Koji Kato; Miki Hatanaka; Kazumasa Muramoto; Takako Kawahara; Tomitake Tsukihara; Eiki Yamashita; Kensuke Tono; Go Ueno; Takaaki Hikima; Hironori Murakami; Yuichi Inubushi; Makina Yabashi; Tetsuya Ishikawa; Masaki Yamamoto; Takashi Ogura; Hiroshi Sugimoto; Jian-Ren Shen; Shinya Yoshikawa; Hideo Ago
Journal:  Nat Methods       Date:  2014-05-11       Impact factor: 28.547

3.  Spectroscopic elucidation of a new heme/copper dioxygen structure type: implications for O···O bond rupture in cytochrome c oxidase.

Authors:  Matthew T Kieber-Emmons; Munzarin F Qayyum; Yuqi Li; Zakaria Halime; Keith O Hodgson; Britt Hedman; Kenneth D Karlin; Edward I Solomon
Journal:  Angew Chem Int Ed Engl       Date:  2011-11-16       Impact factor: 15.336

4.  Density functional study for the bridged dinuclear center based on a high-resolution X-ray crystal structure of ba3 cytochrome c oxidase from Thermus thermophilus.

Authors:  Wen-Ge Han Du; Louis Noodleman
Journal:  Inorg Chem       Date:  2013-11-21       Impact factor: 5.165

Review 5.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

6.  High resolution structure of the ba3 cytochrome c oxidase from Thermus thermophilus in a lipidic environment.

Authors:  Theresa Tiefenbrunn; Wei Liu; Ying Chen; Vsevolod Katritch; C David Stout; James A Fee; Vadim Cherezov
Journal:  PLoS One       Date:  2011-07-21       Impact factor: 3.240

7.  Broken Symmetry DFT Calculations/Analysis for Oxidized and Reduced Dinuclear Center in Cytochrome c Oxidase: Relating Structures, Protonation States, Energies, and Mössbauer Properties in ba3 Thermus thermophilus.

Authors:  Wen-Ge Han Du; Louis Noodleman
Journal:  Inorg Chem       Date:  2015-07-20       Impact factor: 5.165

8.  Characterisation of the Cyanate Inhibited State of Cytochrome c Oxidase.

Authors:  Fabian Kruse; Anh Duc Nguyen; Jovan Dragelj; Ramona Schlesinger; Joachim Heberle; Maria Andrea Mroginski; Inez M Weidinger
Journal:  Sci Rep       Date:  2020-03-02       Impact factor: 4.379

9.  Serial femtosecond crystallography structure of cytochrome c oxidase at room temperature.

Authors:  Rebecka Andersson; Cecilia Safari; Robert Dods; Eriko Nango; Rie Tanaka; Ayumi Yamashita; Takanori Nakane; Kensuke Tono; Yasumasa Joti; Petra Båth; Elin Dunevall; Robert Bosman; Osamu Nureki; So Iwata; Richard Neutze; Gisela Brändén
Journal:  Sci Rep       Date:  2017-07-03       Impact factor: 4.379

10.  X-ray structural analyses of azide-bound cytochrome c oxidases reveal that the H-pathway is critically important for the proton-pumping activity.

Authors:  Atsuhiro Shimada; Keita Hatano; Hitomi Tadehara; Naomine Yano; Kyoko Shinzawa-Itoh; Eiki Yamashita; Kazumasa Muramoto; Tomitake Tsukihara; Shinya Yoshikawa
Journal:  J Biol Chem       Date:  2018-08-03       Impact factor: 5.157

  10 in total

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