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Literature DB >> 20350132

Teaching computers to read the pharmacogenomics literature ... so you don't have to.

Yael Garten, Russ B Altman.

Abstract

Entities: CellLine Chemical Gene Mutation Species

Mesh：

Year: 2010 PMID： 20350132 PMCID： PMC3478760 DOI： 10.2217/pgs.10.48

Source DB: PubMed Journal: Pharmacogenomics ISSN： 1462-2416 Impact factor: 2.533

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44 in total

1. BANNER: an executable survey of advances in biomedical named entity recognition.

Authors: Robert Leaman; Graciela Gonzalez
Journal: Pac Symp Biocomput Date: 2008

2. Synthesis of pharmacokinetic pathways through knowledge acquisition and automated reasoning.

Authors: Luis Tari; Saadat Anwar; Shanshan Liang; Jörg Hakenberg; Chitta Baral
Journal: Pac Symp Biocomput Date: 2010

3. Textpresso: an ontology-based information retrieval and extraction system for biological literature.

Authors: Hans-Michael Müller; Eimear E Kenny; Paul W Sternberg
Journal: PLoS Biol Date: 2004-09-21 Impact factor: 8.029

4. MutationFinder: a high-performance system for extracting point mutation mentions from text.

Authors: J Gregory Caporaso; William A Baumgartner; David A Randolph; K Bretonnel Cohen; Lawrence Hunter
Journal: Bioinformatics Date: 2007-05-11 Impact factor: 6.937

5. Overview of BioCreAtIvE: critical assessment of information extraction for biology.

Authors: Lynette Hirschman; Alexander Yeh; Christian Blaschke; Alfonso Valencia
Journal: BMC Bioinformatics Date: 2005-05-24 Impact factor: 3.169

6. Anni 2.0: a multipurpose text-mining tool for the life sciences.

Authors: Rob Jelier; Martijn J Schuemie; Antoine Veldhoven; Lambert C J Dorssers; Guido Jenster; Jan A Kors
Journal: Genome Biol Date: 2008-06-12 Impact factor: 13.583

7. Overview of BioCreative II gene normalization.

Authors: Alexander A Morgan; Zhiyong Lu; Xinglong Wang; Aaron M Cohen; Juliane Fluck; Patrick Ruch; Anna Divoli; Katrin Fundel; Robert Leaman; Jörg Hakenberg; Chengjie Sun; Heng-hui Liu; Rafael Torres; Michael Krauthammer; William W Lau; Hongfang Liu; Chun-Nan Hsu; Martijn Schuemie; K Bretonnel Cohen; Lynette Hirschman
Journal: Genome Biol Date: 2008-09-01 Impact factor: 13.583

8. STITCH: interaction networks of chemicals and proteins.

Authors: Michael Kuhn; Christian von Mering; Monica Campillos; Lars Juhl Jensen; Peer Bork
Journal: Nucleic Acids Res Date: 2007-12-15 Impact factor: 16.971

Review 9. Linking genes to literature: text mining, information extraction, and retrieval applications for biology.

Authors: Martin Krallinger; Alfonso Valencia; Lynette Hirschman
Journal: Genome Biol Date: 2008-09-01 Impact factor: 13.583

10. Overview of BioCreative II gene mention recognition.

Authors: Larry Smith; Lorraine K Tanabe; Rie Johnson nee Ando; Cheng-Ju Kuo; I-Fang Chung; Chun-Nan Hsu; Yu-Shi Lin; Roman Klinger; Christoph M Friedrich; Kuzman Ganchev; Manabu Torii; Hongfang Liu; Barry Haddow; Craig A Struble; Richard J Povinelli; Andreas Vlachos; William A Baumgartner; Lawrence Hunter; Bob Carpenter; Richard Tzong-Han Tsai; Hong-Jie Dai; Feng Liu; Yifei Chen; Chengjie Sun; Sophia Katrenko; Pieter Adriaans; Christian Blaschke; Rafael Torres; Mariana Neves; Preslav Nakov; Anna Divoli; Manuel Maña-López; Jacinto Mata; W John Wilbur
Journal: Genome Biol Date: 2008-09-01 Impact factor: 13.583

4 in total