Literature DB >> 20348288

PCR-denaturing gradient gel electrophoresis analysis to assess the effects of a genetically modified cucumber mosaic virus-resistant tomato plant on soil microbial communities.

Chih-Hui Lin1, Tzu-Ming Pan.   

Abstract

The effects of a genetically modified cucumber mosaic virus (CMV)-resistant tomato on soil microbial communities were evaluated in this study. Soil position and environmental factors played more dominant roles than the tomato genotype in the variation of soil microbial communities.

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Year:  2010        PMID： 20348288      PMCID： PMC2869137          DOI： 10.1128/AEM.00018-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  15 in total

1.  Detection of genes for periplasmic nitrate reductase in nitrate respiring bacteria and in community DNA.

Authors:  D A Flanagan; L G Gregory; J P Carter; A Karakas-Sen; D J Richardson; S Spiro
Journal:  FEMS Microbiol Lett       Date:  1999-08-15       Impact factor: 2.742

2.  Aerobic nitrate respiration in a nitrite-oxidising bioreactor.

Authors:  C McDevitt; P Burrell; L L Blackall; A G McEwan
Journal:  FEMS Microbiol Lett       Date:  2000-03-01       Impact factor: 2.742

3.  Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients.

Authors:  H Heuer; M Krsek; P Baker; K Smalla; E M Wellington
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

Review 4.  Soil health -- a new challenge for microbiologists and chemists.

Authors:  M Enriqueta Arias; Jose A Gonzalez-Perez; Francisco J Gonzalez-Vila; Andrew S Ball
Journal:  Int Microbiol       Date:  2005-03       Impact factor: 2.479

5.  A new semi-nested PCR protocol to amplify large 18S rRNA gene fragments for PCR-DGGE analysis of soil fungal communities.

Authors:  Miruna Oros-Sichler; Newton C M Gomes; Gabriele Neuber; Kornelia Smalla
Journal:  J Microbiol Methods       Date:  2005-08-15       Impact factor: 2.363

6.  Rhizosphere communities of genetically modified zeaxanthin-accumulating potato plants and their parent cultivar differ less than those of different potato cultivars.

Authors:  Nicole Weinert; Remo Meincke; Christine Gottwald; Holger Heuer; Newton C M Gomes; Michael Schloter; Gabriele Berg; Kornelia Smalla
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792

7.  Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA.

Authors:  G Muyzer; E C de Waal; A G Uitterlinden
Journal:  Appl Environ Microbiol       Date:  1993-03       Impact factor: 4.792

8.  Polymerase chain reaction denaturing gradient gel electrophoresis analysis of the N2-fixing bacterial diversity in soil under Acacia tortilis ssp. raddiana and Balanites aegyptiaca in the dryland part of Senegal.

Authors:  Moudjahidou Demba Diallo; Anne Willems; Nele Vloemans; Sylvie Cousin; Tom T Vandekerckhove; Philippe de Lajudie; Marc Neyra; Wim Vyverman; Monique Gillis; Katleen Van der Gucht
Journal:  Environ Microbiol       Date:  2004-04       Impact factor: 5.491

9.  Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms.

Authors:  George A Kowalchuk; Douwe S Buma; Wietse de Boer; Peter G L Klinkhamer; Johannes A van Veen
Journal:  Antonie Van Leeuwenhoek       Date:  2002-08       Impact factor: 2.271

10.  Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments.

Authors:  G A Kowalchuk; J R Stephen; W De Boer; J I Prosser; T M Embley; J W Woldendorp
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792
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  3 in total

1.  Changes in Actinomycetes community structure under the influence of Bt transgenic brinjal crop in a tropical agroecosystem.

Authors:  Amit Kishore Singh; Major Singh; Suresh Kumar Dubey
Journal:  BMC Microbiol       Date:  2013-05-29       Impact factor: 3.605

2.  Impact of transgenic wheat with wheat yellow mosaic virus resistance on microbial community diversity and enzyme activity in rhizosphere soil.

Authors:  Jirong Wu; Mingzheng Yu; Jianhong Xu; Juan Du; Fang Ji; Fei Dong; Xinhai Li; Jianrong Shi
Journal:  PLoS One       Date:  2014-06-04       Impact factor: 3.240

Review 3.  Soil fungal resources in annual cropping systems and their potential for management.

Authors:  Walid Ellouze; Ahmad Esmaeili Taheri; Luke D Bainard; Chao Yang; Navid Bazghaleh; Adriana Navarro-Borrell; Keith Hanson; Chantal Hamel
Journal:  Biomed Res Int       Date:  2014-08-28       Impact factor: 3.411
  3 in total

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