Literature DB >> 20298241

Nucleolar RNPs: from genes to functional snoRNAs in plants.

Julie Rodor1, Ingrid Letelier, Loreto Holuigue, Manuel Echeverria.   

Abstract

The snoRNAs (small nucleolar RNAs) and related scaRNAs (small RNAs in the Cajal bodies) represent a major class of nuclear RNAs that guide 2'-O-ribose methylation and pseudouridylation of rRNAs, snRNAs (small nuclear RNAs) and other RNA targets. In vivo, all snoRNAs associate with a set of four highly conserved nucleolar proteins, forming the functional snoRNPs (small nucleolar ribonucleoproteins). The core structure of these mature snoRNPs has now been well described in eukaryotes, but less is known of their biogenesis. Recent data in animals and yeast reveal that assembly of the snoRNPs is a complex process that implicates several auxiliary proteins and transient protein-protein interactions. This new level of snoRNP regulation is now beginning to be unravelled in animals and yeast, but remains unexplored in plants. In the present paper, we review recent data from genomic and functional analysis allowing the identification and study of factors controlling the biogenesis of plant snoRNPs and their impact on plant development.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20298241     DOI: 10.1042/BST0380672

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  11 in total

1.  Arabidopsis small nucleolar RNA monitors the efficient pre-rRNA processing during ribosome biogenesis.

Authors:  Pan Zhu; Yuqiu Wang; Nanxun Qin; Feng Wang; Jia Wang; Xing Wang Deng; Danmeng Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-05       Impact factor: 11.205

2.  Drosophila Spag is the homolog of RNA polymerase II-associated protein 3 (RPAP3) and recruits the heat shock proteins 70 and 90 (Hsp70 and Hsp90) during the assembly of cellular machineries.

Authors:  Nour El Houda Benbahouche; Ioannis Iliopoulos; István Török; Joachim Marhold; Julien Henri; Andrey V Kajava; Robert Farkaš; Tore Kempf; Martina Schnölzer; Philippe Meyer; István Kiss; Edouard Bertrand; Bernard M Mechler; Bérengère Pradet-Balade
Journal:  J Biol Chem       Date:  2014-01-06       Impact factor: 5.157

3.  Expression, purification and analysis of the activity of enzymes from the pentose phosphate pathway.

Authors:  Patrick K Arthur; Luigi J Alvarado; T Kwaku Dayie
Journal:  Protein Expr Purif       Date:  2010-11-24       Impact factor: 1.650

4.  Plants, like mammals, but unlike Saccharomyces, do not regulate nuclear-cytoplasmic tRNA trafficking in response to nutrient stress.

Authors:  Aaron D Johnstone; Robert T Mullen; Dev Mangroo
Journal:  Plant Signal Behav       Date:  2011-08-01

5.  Identification and Expression Analysis of Ribosome Biogenesis Factor Co-orthologs in Solanum lycopersicum.

Authors:  Stefan Simm; Sotirios Fragkostefanakis; Puneet Paul; Mario Keller; Jens Einloft; Klaus-Dieter Scharf; Enrico Schleiff
Journal:  Bioinform Biol Insights       Date:  2015-02-04

6.  Phylogenetic distribution of plant snoRNA families.

Authors:  Deblina Patra Bhattacharya; Sebastian Canzler; Stephanie Kehr; Jana Hertel; Ivo Grosse; Peter F Stadler
Journal:  BMC Genomics       Date:  2016-11-24       Impact factor: 3.969

7.  RXLR and CRN Effectors from the Sunflower Downy Mildew Pathogen Plasmopara halstedii Induce Hypersensitive-Like Responses in Resistant Sunflower Lines.

Authors:  Quentin Gascuel; Luis Buendia; Yann Pecrix; Nicolas Blanchet; Stéphane Muños; Felicity Vear; Laurence Godiard
Journal:  Front Plant Sci       Date:  2016-12-19       Impact factor: 5.753

8.  The box C/D snoRNP assembly factor Bcd1 interacts with the histone chaperone Rtt106 and controls its transcription dependent activity.

Authors:  Benoît Bragantini; Christophe Charron; Maxime Bourguet; Arnaud Paul; Decebal Tiotiu; Benjamin Rothé; Hélène Marty; Guillaume Terral; Steve Hessmann; Laurence Decourty; Marie-Eve Chagot; Jean-Marc Strub; Séverine Massenet; Edouard Bertrand; Marc Quinternet; Cosmin Saveanu; Sarah Cianférani; Stéphane Labialle; Xavier Manival; Bruno Charpentier
Journal:  Nat Commun       Date:  2021-03-25       Impact factor: 14.919

9.  Genome-wide mapping of histone H3 lysine 4 trimethylation in Eucalyptus grandis developing xylem.

Authors:  Steven G Hussey; Eshchar Mizrachi; Andrew Groover; Dave K Berger; Alexander A Myburg
Journal:  BMC Plant Biol       Date:  2015-05-10       Impact factor: 4.215

10.  The evolution of the ribosome biogenesis pathway from a yeast perspective.

Authors:  Ingo Ebersberger; Stefan Simm; Matthias S Leisegang; Peter Schmitzberger; Oliver Mirus; Arndt von Haeseler; Markus T Bohnsack; Enrico Schleiff
Journal:  Nucleic Acids Res       Date:  2013-11-14       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.