Literature DB >> 20237203

Comprehensive screening of human genes with inhibitory effects on yeast growth and validation of a yeast cell-based system for screening chemicals.

Masayuki Sekigawa1, Tatsuki Kunoh, Shu-Ichi Wada, Yukio Mukai, Kazuhiko Ohshima, Shinji Ohta, Naoki Goshima, Ryuzo Sasaki, Tamio Mizukami.   

Abstract

To evaluate yeast as a high-throughput cell-based system for screening chemicals that may lead to drug development, 10,302 full-length human cDNAs (~50% of the total cDNAs) were introduced into yeast. Approximately 5.6% (583 clones) of the cDNAs repressed the growth of yeast. Notably, ~25% of the repressive cDNAs encoded uncharacterized proteins. Small chemicals can be readily surveyed by monitoring their restorative effects on the growth of yeast. The authors focused on protein kinases because protein kinases are involved in various diseases. Among 263 protein kinase cDNAs (~50% of the total) expressed in yeast, 60 cDNAs (~23%), including c-Yes, a member of the Src tyrosine kinase family, inhibited the growth of yeast. Known inhibitors for protein kinases were examined for whether they reversed the c-Yes-induced inhibition of the yeast growth. Among 85 inhibitors tested, 6 compounds (PP2, PP1, SU6656, purvalanol, radicicol, and geldanamycin) reversed the inhibition, indicating a high specificity sufficient for validating this screening system. Human c-Yes was found to interact with Hsc82, one of the yeast chaperones. Radicicol and geldanamycin probably exerted their actions through interactions with Hsc82. These results indicate that when human proteins requiring molecular chaperones for their activities are subjected to the yeast screening system, 2 groups of chemicals may be found. The actions of one group are exerted through direct interactions with the human proteins, whereas those of the other group are mediated through interactions with chaperones.

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Year:  2010        PMID: 20237203     DOI: 10.1177/1087057110363822

Source DB:  PubMed          Journal:  J Biomol Screen        ISSN: 1087-0571


  8 in total

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Authors:  Aashiq H Kachroo; Michelle Vandeloo; Brittany M Greco; Mudabir Abdullah
Journal:  Dis Model Mech       Date:  2022-06-06       Impact factor: 5.732

Review 2.  Efforts to make and apply humanized yeast.

Authors:  Jon M Laurent; Jonathan H Young; Aashiq H Kachroo; Edward M Marcotte
Journal:  Brief Funct Genomics       Date:  2015-10-13       Impact factor: 4.241

3.  Cross-Species Complementation of Nonessential Yeast Genes Establishes Platforms for Testing Inhibitors of Human Proteins.

Authors:  Akil Hamza; Maureen R M Driessen; Erik Tammpere; Nigel J O'Neil; Philip Hieter
Journal:  Genetics       Date:  2020-01-14       Impact factor: 4.562

4.  Sentinel interaction mapping - a generic approach for the functional analysis of human disease gene variants using yeast.

Authors:  Barry P Young; Kathryn L Post; Jesse T Chao; Fabian Meili; Kurt Haas; Christopher Loewen
Journal:  Dis Model Mech       Date:  2020-07-08       Impact factor: 5.758

5.  A human kinase yeast array for the identification of kinases modulating phosphorylation-dependent protein-protein interactions.

Authors:  Stefanie Jehle; Natalia Kunowska; Nouhad Benlasfer; Jonathan Woodsmith; Gert Weber; Markus C Wahl; Ulrich Stelzl
Journal:  Mol Syst Biol       Date:  2022-03       Impact factor: 11.429

6.  Cadmium Sulfide Quantum Dots Adversely Affect Gametogenesis in Saccharomyces cerevisiae.

Authors:  Riccardo Rossi; Roberta Ruotolo; Giuseppe De Giorgio; Marta Marmiroli; Marco Villani; Andrea Zappettini; Nelson Marmiroli
Journal:  Nanomaterials (Basel)       Date:  2022-06-27       Impact factor: 5.719

7.  Human Dynactin-Associated Protein Transforms NIH3T3 Cells to Generate Highly Vascularized Tumors with Weak Cell-Cell Interaction.

Authors:  Tatsuki Kunoh; Weixiang Wang; Hiroaki Kobayashi; Daisuke Matsuzaki; Yuki Togo; Masahiro Tokuyama; Miho Hosoi; Koichi Koseki; Shu-Ichi Wada; Nobuo Nagai; Toshinobu Nakamura; Shintaro Nomura; Makoto Hasegawa; Ryuzo Sasaki; Tamio Mizukami
Journal:  PLoS One       Date:  2015-08-18       Impact factor: 3.240

Review 8.  How Surrogate and Chemical Genetics in Model Organisms Can Suggest Therapies for Human Genetic Diseases.

Authors:  Katherine A Strynatka; Michelle C Gurrola-Gal; Jason N Berman; Christopher R McMaster
Journal:  Genetics       Date:  2018-03       Impact factor: 4.562

  8 in total

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