Literature DB >> 20231027

Genetic characterization of HIV-1 from semen and blood from clade C-infected subjects from India and effect of therapy in these body compartments.

Chengli Shen1, Ming Ding, Jodi K Craigo, Patrick Tarwater, Ramdas Chatterjee, Pratima Roy, Subhasish K Guha, Bibhuti Saha, Dolonchapa Modak, Dhrubak Neogi, Yue Chen, Phalguni Gupta.   

Abstract

Biologic and genetic differences between HIV-1 clade C in India and clade B in US suggest that the effect of anti-viral therapy in various body compartments may differ between these two clades. We examined the effect of therapy on viral loads in semen and blood of HIV-1-clade C infected subjects from India and evaluated whether HIV-1 in the semen is different from that in blood in these subjects. HIV-1 RNA was detected in semen and blood at all stages of the disease. Viral loads in semen and blood were strongly correlated with each other, but not with the CD4+ T cell count. Anti-viral treatment reduced viral load drastically in blood and semen within one month of post therapy. Genetic characterization of HIV-1 in the semen and blood demonstrated that they were highly compartmentalized. These data have important implications of sexual transmission of HIV-1 in clade C HIV-1 infected subjects. 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20231027      PMCID: PMC2872239          DOI: 10.1016/j.virol.2010.01.033

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  34 in total

1.  Dynamics of viral load rebound in plasma and semen after stopping effective antiretroviral therapy.

Authors:  Giuseppina Liuzzi; Gianpiero D'Offizi; Simone Topino; Mauro Zaccarelli; Alessandra Amendola; Maria Rosaria Capobianchi; Carlo Federico Perno; Pasquale Narciso; Andrea Antinori
Journal:  AIDS       Date:  2003-05-02       Impact factor: 4.177

2.  HIV type 1 subtypes circulating in eastern and northeastern regions of India.

Authors:  Dibyakanti Mandal; S Jana; S K Bhattacharya; Sekhar Chakrabarti
Journal:  AIDS Res Hum Retroviruses       Date:  2002-11-01       Impact factor: 2.205

3.  Detecting isolation by distance using phylogenies of genes.

Authors:  M Slatkin; W P Maddison
Journal:  Genetics       Date:  1990-09       Impact factor: 4.562

4.  A cladistic measure of gene flow inferred from the phylogenies of alleles.

Authors:  M Slatkin; W P Maddison
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

5.  Genetic characterization of human immunodeficiency virus type 1 in blood and genital secretions: evidence for viral compartmentalization and selection during sexual transmission.

Authors:  T Zhu; N Wang; A Carr; D S Nam; R Moor-Jankowski; D A Cooper; D D Ho
Journal:  J Virol       Date:  1996-05       Impact factor: 5.103

6.  Innate immunity in human immunodeficiency virus infection: effect of viremia on natural killer cell function.

Authors:  Shyam Kottilil; Tae-Wook Chun; Susan Moir; Shuying Liu; Mary McLaughlin; Claire W Hallahan; Frank Maldarelli; Lawrence Corey; Anthony S Fauci
Journal:  J Infect Dis       Date:  2003-03-13       Impact factor: 5.226

7.  Adherence to antiretroviral therapy and persistence of HIV RNA in semen.

Authors:  Paulo F Barroso; Mauro Schechter; Phalguni Gupta; Clarisse Bressan; Antonieta Bomfim; Lee H Harrison
Journal:  J Acquir Immune Defic Syndr       Date:  2003-04-01       Impact factor: 3.731

8.  Genetic relationships determined by a DNA heteroduplex mobility assay: analysis of HIV-1 env genes.

Authors:  E L Delwart; E G Shpaer; J Louwagie; F E McCutchan; M Grez; H Rübsamen-Waigmann; J I Mullins
Journal:  Science       Date:  1993-11-19       Impact factor: 47.728

9.  Bisecting N-acetylglucosamine on K562 cells suppresses natural killer cytotoxicity and promotes spleen colonization.

Authors:  M Yoshimura; Y Ihara; A Ohnishi; N Ijuhin; T Nishiura; Y Kanakura; Y Matsuzawa; N Taniguchi
Journal:  Cancer Res       Date:  1996-01-15       Impact factor: 12.701

10.  Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences.

Authors:  Mark A Jensen; Fu-Sheng Li; Angélique B van 't Wout; David C Nickle; Daniel Shriner; Hong-Xia He; Sherry McLaughlin; Raj Shankarappa; Joseph B Margolick; James I Mullins
Journal:  J Virol       Date:  2003-12       Impact factor: 5.103

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  6 in total

1.  HIV-1 Populations in Semen Arise through Multiple Mechanisms.

Authors:  Jeffrey A Anderson; Li-Hua Ping; Oliver Dibben; Cassandra B Jabara; Leslie Arney; Laura Kincer; Yuyang Tang; Marcia Hobbs; Irving Hoffman; Peter Kazembe; Corbin D Jones; Persephone Borrow; Susan Fiscus; Myron S Cohen; Ronald Swanstrom
Journal:  PLoS Pathog       Date:  2010-08-19       Impact factor: 6.823

Review 2.  HIV-1 vaginal transmission: cell-free or cell-associated virus?

Authors:  Victor Barreto-de-Souza; Anush Arakelyan; Leonid Margolis; Christophe Vanpouille
Journal:  Am J Reprod Immunol       Date:  2014-04-15       Impact factor: 3.886

Review 3.  AIDS vaccines and preexposure prophylaxis: is synergy possible?

Authors:  Jean-Louis Excler; Wasima Rida; Frances Priddy; Jill Gilmour; Adrian B McDermott; Anatoli Kamali; Omu Anzala; Gaudensia Mutua; Eduard J Sanders; Wayne Koff; Seth Berkley; Patricia Fast
Journal:  AIDS Res Hum Retroviruses       Date:  2010-12-16       Impact factor: 2.205

4.  Impact of short-term HAART initiated during the chronic stage or shortly post-exposure on SIV infection of male genital organs.

Authors:  Marina Moreau; Anna Le Tortorec; Claire Deleage; Charles Brown; Hélène Denis; Anne-Pascale Satie; Olivier Bourry; Nathalie Deureuddre-Bosquet; Pierre Roques; Roger Le Grand; Nathalie Dejucq-Rainsford
Journal:  PLoS One       Date:  2012-05-17       Impact factor: 3.240

5.  Sanger and Next Generation Sequencing Approaches to Evaluate HIV-1 Virus in Blood Compartments.

Authors:  Andrea Arias; Pablo López; Raphael Sánchez; Yasuhiro Yamamura; Vanessa Rivera-Amill
Journal:  Int J Environ Res Public Health       Date:  2018-08-09       Impact factor: 3.390

6.  HIV-1 RNA may decline more slowly in semen than in blood following initiation of efavirenz-based antiretroviral therapy.

Authors:  Susan M Graham; Sarah E Holte; Joan A Dragavon; Kelly M Ramko; Kishor N Mandaliya; R Scott McClelland; Norbert M Peshu; Eduard J Sanders; John N Krieger; Robert W Coombs
Journal:  PLoS One       Date:  2012-08-13       Impact factor: 3.240

  6 in total

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