| Literature DB >> 20230186 |
Sihong You1, Jiannong Zhou, Senqing Chen, Ping Zhou, Jinghuan Lv, Xiao Han, Yujie Sun.
Abstract
BACKGROUND: Approximately 90% of colorectal cancer (CRC) deaths arise from the metastatic dissemination of primary tumors. It is difficult to predict metastasis of colorectal cancer, especially for patients with the same pathological subtype and differentiation. AIMS. To identify biomarkers for predicting CRC metastasis. PATIENTS AND METHODS: We collected 19 primary tumors of CRC with identical pathological subtype, differentiation, and comparable Dukes' stages from patients with matched age and gender but completely different prognosis. Patients were divided into one high-risk and one low-risk group for metastasis. The expression levels of SHH, PTCH1, and sFRP1, which are components of the Hedgehog signaling pathway, were determined by real-time reverse transcription polymerase chain reaction (RT-PCR). To investigate further the correlation between expression level of PTCH1 and metastatic potential of CRC cells, we compared the mRNA and protein levels of the PTCH1 gene in LoVo cells with high metastatic potential and in HT-29, SW480, and SW620 cells with low metastatic potential by RT-PCR and flow cytometry.Entities:
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Year: 2010 PMID: 20230186 PMCID: PMC2939517 DOI: 10.3109/03009731003668316
Source DB: PubMed Journal: Ups J Med Sci ISSN: 0300-9734 Impact factor: 2.384
Sequences of primer pairs.
| Genes | Primers (5'→3') | Size (bp) | GeneBank | |
|---|---|---|---|---|
| SHH | F | CAATTACAACCCCGACATCATA | 194 | NM_000193 |
| R | CCTCGTAGTGCAGAGACTCCTC | |||
| PTCH1 | F | GGGTGGCACAGTCAAGAACAG | 108 | NM_000264 |
| R | TACCCCTTGAAGTGCTCGTACA | |||
| sFRP1 | F | TCTACTGGCCCGAGATGCTT | 147 | NM_003012 |
| R | TGGCCTCAGATTTCAACTCGTT | |||
| β-Actin | F | GAAATCGTGCGTGACATTAA | 179 | NM_001101 |
| R | AAGGAAGGCTGGAAGAGTG | |||
Figure 1.Expression level of a target gene was determined by real-time PCR. Calculation of statistical difference between high-risk group and low-risk group utilized Mann-Whitney U test.
Figure 2.A: HT-29, SW480, SW620, and LoVo cells were seeded in 12-well plates and cultured for 12–24 h until they reached 90% confluence before scratching across the cell monolayer with a plastic tip. Cells were then grown in serum-free medium. Wound-healing was observed at every 6 hours within the scrape line, and representative scrape lines were photographed. B: Quantitative analysis of three independent cell motility experiments with LoVo, HT-29, SW480, and SW620 cells. C: RT-PCR experiments to demonstrate expression levels of PTCH1 mRNA in the same cell lines.
Figure 3.Flow cytometry analysis of different cell lines. Rabbit polyclonal to Patched/PTCH primary antibody was used to label PTCH1 protein on CRC cells. FITC-conjugated goat anti-rabbit IgG antibody was used as secondary antibody. A: Typical flow cytometric dot plots. B: Histograms show results of three independent experiments, and bars indicate standard deviations (independent sample t test).