Literature DB >> 20227411

Crystal structure of the HIV-1 integrase core domain in complex with sucrose reveals details of an allosteric inhibitory binding site.

Jerome Wielens1, Stephen J Headey, Dharshini Jeevarajah, David I Rhodes, John Deadman, David K Chalmers, Martin J Scanlon, Michael W Parker.   

Abstract

HIV integrase (IN) is an essential enzyme in HIV replication and an important target for drug design. IN has been shown to interact with a number of cellular and viral proteins during the integration process. Disruption of these important interactions could provide a mechanism for allosteric inhibition of IN. We present the highest resolution crystal structure of the IN core domain to date. We also present a crystal structure of the IN core domain in complex with sucrose which is bound at the dimer interface in a region that has previously been reported to bind integrase inhibitors. Copyright 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20227411     DOI: 10.1016/j.febslet.2010.03.016

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  10 in total

Review 1.  Allosteric inhibitor development targeting HIV-1 integrase.

Authors:  Laith Q Al-Mawsawi; Nouri Neamati
Journal:  ChemMedChem       Date:  2011-01-12       Impact factor: 3.466

2.  Molecular dynamics approaches estimate the binding energy of HIV-1 integrase inhibitors and correlate with in vitro activity.

Authors:  Barry C Johnson; Mathieu Métifiot; Yves Pommier; Stephen H Hughes
Journal:  Antimicrob Agents Chemother       Date:  2011-10-28       Impact factor: 5.191

3.  Computational design of a full-length model of HIV-1 integrase: modeling of new inhibitors and comparison of their calculated binding energies with those previously studied.

Authors:  Selami Ercan; Necmettin Pirinccioglu
Journal:  J Mol Model       Date:  2013-08-02       Impact factor: 1.810

Review 4.  Structural biology of retroviral DNA integration.

Authors:  Xiang Li; Lavanya Krishnan; Peter Cherepanov; Alan Engelman
Journal:  Virology       Date:  2011-01-08       Impact factor: 3.616

5.  Binding modes of diketo-acid inhibitors of HIV-1 integrase: a comparative molecular dynamics simulation study.

Authors:  Meilan Huang; Guy H Grant; W Graham Richards
Journal:  J Mol Graph Model       Date:  2011-04-09       Impact factor: 2.518

6.  Small molecule inhibitors of the LEDGF site of human immunodeficiency virus integrase identified by fragment screening and structure based design.

Authors:  Thomas S Peat; David I Rhodes; Nick Vandegraaff; Giang Le; Jessica A Smith; Lisa J Clark; Eric D Jones; Jonathan A V Coates; Neeranat Thienthong; Janet Newman; Olan Dolezal; Roger Mulder; John H Ryan; G Paul Savage; Craig L Francis; John J Deadman
Journal:  PLoS One       Date:  2012-07-10       Impact factor: 3.240

7.  Design of inhibitors of the HIV-1 integrase core domain using virtual screening.

Authors:  Preetom Regon; Dhrubajyoti Gogoi; Ashok Kumar Rai; Manabjyoti Bordoloi; Rajib Lochan Bezbaruah
Journal:  Bioinformation       Date:  2014-02-19

8.  Inhibiting the HIV integration process: past, present, and the future.

Authors:  Roberto Di Santo
Journal:  J Med Chem       Date:  2013-09-25       Impact factor: 7.446

9.  Basic quinolinonyl diketo acid derivatives as inhibitors of HIV integrase and their activity against RNase H function of reverse transcriptase.

Authors:  Roberta Costi; Mathieu Métifiot; Suhman Chung; Giuliana Cuzzucoli Crucitti; Kasthuraiah Maddali; Luca Pescatori; Antonella Messore; Valentina Noemi Madia; Giovanni Pupo; Luigi Scipione; Silvano Tortorella; Francesco Saverio Di Leva; Sandro Cosconati; Luciana Marinelli; Ettore Novellino; Stuart F J Le Grice; Angela Corona; Yves Pommier; Christophe Marchand; Roberto Di Santo
Journal:  J Med Chem       Date:  2014-04-11       Impact factor: 7.446

10.  Comparison of Newly Assembled Full Length HIV-1 Integrase With Prototype Foamy Virus Integrase: Structure-Function Prospective.

Authors:  Mohammad Reza Dayer
Journal:  Jundishapur J Microbiol       Date:  2016-02-15       Impact factor: 0.747

  10 in total

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