Literature DB >> 20224166

The National BioResource Project Medaka (NBRP Medaka): an integrated bioresource for biological and biomedical sciences.

Takao Sasado1, Minoru Tanaka, Kayo Kobayashi, Tadashi Sato, Mitsuru Sakaizumi, Kiyoshi Naruse.   

Abstract

Medaka (Oryzias latipes) is a small freshwater teleost fish that serves as a model vertebrate organism in various fields of biology including development, genetics, toxicology and evolution. The recent completion of the medaka genome sequencing project has promoted the use of medaka as a comparative and complementary material for research on other vertebrates such as zebrafish, sticklebacks, mice, and humans. The Japanese government has supported the development of Medaka Bioresources since 2002. The second term of the Medaka Bioresource Project started in 2007. The National Institute for Basic Biology and Niigata University were selected as the core organizations for this project. More than 400 strains including more than 300 spontaneous and induced mutants, 8 inbred lines, 21 transgenic lines, 20 medaka-related species and 66 wild stock lines of medaka are now being provided to the scientific community and educational non-profit organizations. In addition to these live fish, NBRP Medaka is also able to provide cDNA/EST clones such as full-length cDNA and BAC/fosmid clones covering 90% of the medaka genome. All these resources can be found on the NBRP Medaka website (http://shigen.lab.nig.ac.jp/medaka/), and users can order any resource using the shopping cart system. We believe these resources will facilitate the further use of medaka and help to promote new findings for this vertebrate species.

Entities:  

Mesh:

Year:  2010        PMID: 20224166     DOI: 10.1538/expanim.59.13

Source DB:  PubMed          Journal:  Exp Anim        ISSN: 0007-5124


  16 in total

1.  Immunoglobulin light chains in medaka (Oryzias latipes).

Authors:  Susana Magadán-Mompó; Anastasia M Zimmerman; Christian Sánchez-Espinel; Francisco Gambón-Deza
Journal:  Immunogenetics       Date:  2013-02-17       Impact factor: 2.846

2.  Differential GFP expression patterns induced by different heavy metals in Tg(hsp70:gfp) transgenic medaka (Oryzias latipes).

Authors:  Grace Hwee Boon Ng; Hongyan Xu; Na Pi; Barry C Kelly; Zhiyuan Gong
Journal:  Mar Biotechnol (NY)       Date:  2015-02-05       Impact factor: 3.619

3.  Multiple isoforms of HSP70 and HSP90 required for betanodavirus multiplication in medaka cells.

Authors:  Kosuke Zenke; Yasushi Okinaka
Journal:  Arch Virol       Date:  2022-06-26       Impact factor: 2.685

4.  Genomic and phenotypic characterization of a wild medaka population: towards the establishment of an isogenic population genetic resource in fish.

Authors:  Mikhail Spivakov; Thomas O Auer; Ravindra Peravali; Ian Dunham; Dirk Dolle; Asao Fujiyama; Atsushi Toyoda; Tomoyuki Aizu; Yohei Minakuchi; Felix Loosli; Kiyoshi Naruse; Ewan Birney; Joachim Wittbrodt
Journal:  G3 (Bethesda)       Date:  2014-03-20       Impact factor: 3.154

5.  Genetic control of startle behavior in medaka fish.

Authors:  Satomi Tsuboko; Tetsuaki Kimura; Minori Shinya; Yuji Suehiro; Teruhiro Okuyama; Atsuko Shimada; Hiroyuki Takeda; Kiyoshi Naruse; Takeo Kubo; Hideaki Takeuchi
Journal:  PLoS One       Date:  2014-11-13       Impact factor: 3.240

Review 6.  The genomic and genetic toolbox of the teleost medaka (Oryzias latipes).

Authors:  Stephan Kirchmaier; Kiyoshi Naruse; Joachim Wittbrodt; Felix Loosli
Journal:  Genetics       Date:  2015-04       Impact factor: 4.562

7.  Interspecies Behavioral Variability of Medaka Fish Assessed by Comparative Phenomics.

Authors:  Gilbert Audira; Petrus Siregar; Kelvin H-C Chen; Marri Jmelou M Roldan; Jong-Chin Huang; Hong-Thih Lai; Chung-Der Hsiao
Journal:  Int J Mol Sci       Date:  2021-05-26       Impact factor: 5.923

8.  GFP transgenic medaka (Oryzias latipes) under the inducible cyp1a promoter provide a sensitive and convenient biological indicator for the presence of TCDD and other persistent organic chemicals.

Authors:  Grace Hwee Boon Ng; Zhiyuan Gong
Journal:  PLoS One       Date:  2013-05-20       Impact factor: 3.240

9.  Expression profiles of branchial FXYD proteins in the brackish medaka Oryzias dancena: a potential saltwater fish model for studies of osmoregulation.

Authors:  Wen-Kai Yang; Chao-Kai Kang; Chia-Hao Chang; An-Di Hsu; Tsung-Han Lee; Pung-Pung Hwang
Journal:  PLoS One       Date:  2013-01-31       Impact factor: 3.240

Review 10.  Advances in genomics of bony fish.

Authors:  Herman P Spaink; Hans J Jansen; Ron P Dirks
Journal:  Brief Funct Genomics       Date:  2013-11-29       Impact factor: 4.241

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