Literature DB >> 20221916

Enzyme databases.

Dietmar Schomburg1, Ida Schomburg.   

Abstract

Enzymes are catalysts for the chemical reactions in the metabolism of all organisms and play a key role in the regulation of metabolic steps within the cells, as drug targets, and in a wide range of biotechnological applications. With respect to reaction type, they are grouped into six classes, namely oxidoreductases, transferases, hydrolases, lyases, and ligases. EC-Numbers are assigned by the IUBMB. Enzyme functional databases cover a wide range of properties and functions, such as occurrence, kinetics of enzyme-catalyzed reactions, structure, or metabolic function. BRENDA stores a large variety of different data for all classified enzymes whereas KEGG, MEROPS, MetaCyc, REBASE, CAzy, ESTHER, PeroxiBase, and KinBase specialize in either certain aspects of enzyme function or specific enzyme classes, organisms, or metabolic pathways. Databases covering enzyme nomenclature are ExplorEnz, SIB-ENZYME, and IntEnz.

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Year:  2010        PMID: 20221916     DOI: 10.1007/978-1-60327-241-4_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

1.  Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicine.

Authors:  Peng Zheng; Yongliang Xia; Guohua Xiao; Chenghui Xiong; Xiao Hu; Siwei Zhang; Huajun Zheng; Yin Huang; Yan Zhou; Shengyue Wang; Guo-Ping Zhao; Xingzhong Liu; Raymond J St Leger; Chengshu Wang
Journal:  Genome Biol       Date:  2011-11-23       Impact factor: 13.583

2.  Genome sequence and spore germination-associated transcriptome analysis of Corynespora cassiicola from cucumber.

Authors:  Shigang Gao; Rong Zeng; Lihui Xu; Zhiwei Song; Ping Gao; Fuming Dai
Journal:  BMC Microbiol       Date:  2020-07-08       Impact factor: 3.605

3.  Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in the fungus Glarea lozoyensis.

Authors:  Li Chen; Qun Yue; Xinyu Zhang; Meichun Xiang; Chengshu Wang; Shaojie Li; Yongsheng Che; Francisco Javier Ortiz-López; Gerald F Bills; Xingzhong Liu; Zhiqiang An
Journal:  BMC Genomics       Date:  2013-05-20       Impact factor: 3.969

4.  Genome sequence and virulence variation-related transcriptome profiles of Curvularia lunata, an important maize pathogenic fungus.

Authors:  Shigang Gao; Yaqian Li; Jinxin Gao; Yujuan Suo; Kehe Fu; Yingying Li; Jie Chen
Journal:  BMC Genomics       Date:  2014-07-24       Impact factor: 3.969

  4 in total

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