Literature DB >> 20221681

Phylogenetic analyses of an isolate obtained from potato in 1985 revealed potato virus X was introduced to China via multiple events.

Xiao-Qing Yu1, Jin-Lei Jia, Cheng-Ling Zhang, Xiang-Dong Li, Yu-Jun Wang.   

Abstract

Potato virus X (PVX) is one of the most common plant viruses that cause great economic losses to solanaceous plants. We have previously reported the complete genomic sequence of the 2006 Chinese potato isolate FX21 and demonstrated that PVX isolates cluster into two groups: Eurasia and America. Here, we present the complete genomic sequence of one PVX isolate collected from potato in 1985 (PVX-1985). The genome of PVX-1985 is identical to that of FX21 in length and has the same genomic structure. PVX-1985, which like FX21 fell within the Eurasia group, clustered together with isolates from Europe, whereas FX21 clustered together with isolates of primarily Asian origin. Phylogenetic analyses of the complete genomic sequences and of CP gene sequences showed that Chinese PVX isolates have different origins and were introduced via multiple events. Though all the open reading frames of PVX are under negative/purifying selection, the central region of RNA-dependent RNA polymerase is under positive/diversifying selection.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20221681     DOI: 10.1007/s11262-010-0468-5

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  22 in total

1.  Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals.

Authors:  W J Swanson; Z Yang; M F Wolfner; C F Aquadro
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-20       Impact factor: 11.205

2.  Molecular analysis of a resistance-breaking strain of potato virus X.

Authors:  T Kavanagh; M Goulden; S Santa Cruz; S Chapman; I Barker; D Baulcombe
Journal:  Virology       Date:  1992-08       Impact factor: 3.616

3.  Complete cDNA sequence of a South American isolate of potato virus X.

Authors:  B E Orman; R M Celnik; A M Mandel; H N Torres; A N Mentaberry
Journal:  Virus Res       Date:  1990-07       Impact factor: 3.303

4.  Acquisition of multiple virulence/avirulence determinants by potato virus X (PVX) has occurred through convergent evolution rather than through recombination.

Authors:  I Malcuit; W de Jong; D C Baulcombe; D C Shields; T A Kavanagh
Journal:  Virus Genes       Date:  2000       Impact factor: 2.332

5.  The nucleotide sequence of potato virus X RNA.

Authors:  K G Skryabin; A S Kraev; M N Rozanov; B K Chernov; L I Lukasheva; J G Atabekov
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

6.  Unbiased estimation of the rates of synonymous and nonsynonymous substitution.

Authors:  W H Li
Journal:  J Mol Evol       Date:  1993-01       Impact factor: 2.395

7.  Genetic variability and phylogenetic analysis of hosta virus X.

Authors:  O L Fajolu; R-H Wen; A S Windham; M T Windham; J K Moulton; M R Hajimorad
Journal:  Arch Virol       Date:  2009-10-17       Impact factor: 2.574

8.  The complete nucleotide sequence of potato virus X and its homologies at the amino acid level with various plus-stranded RNA viruses.

Authors:  M J Huisman; H J Linthorst; J F Bol; J C Cornelissen
Journal:  J Gen Virol       Date:  1988-08       Impact factor: 3.891

9.  Molecular population genetics of Cucumber mosaic virus in California: evidence for founder effects and reassortment.

Authors:  Han-Xin Lin; Luis Rubio; Ashleigh B Smythe; Bryce W Falk
Journal:  J Virol       Date:  2004-06       Impact factor: 5.103

10.  Statistical methods for detecting molecular adaptation.

Authors: 
Journal:  Trends Ecol Evol       Date:  2000-12-01       Impact factor: 17.712

View more
  6 in total

1.  Deep sequencing of virus-derived small interfering RNAs and RNA from viral particles shows highly similar mutational landscapes of a plant virus population.

Authors:  Denis Kutnjak; Matevž Rupar; Ion Gutierrez-Aguirre; Tomaž Curk; Jan F Kreuze; Maja Ravnikar
Journal:  J Virol       Date:  2015-02-11       Impact factor: 5.103

2.  Population genetic analysis of potato virus X based on the CP gene sequence.

Authors:  Mohammad Hajizadeh; Nemat Sokhandan-Bashir
Journal:  Virusdisease       Date:  2017-02-06

3.  Molecular characterization and field survey of Iranian potato virus X isolates.

Authors:  Hossain Massumi; Soodabe Poormohammadi; Shabnam Pishyar; Mohammad Maddahian; Jahangir Heydarnejad; Akbar Hosseini-Pour; Katherine van Bysterveldt; Arvind Varsani
Journal:  Virusdisease       Date:  2014-05-25

4.  Potato virus X: A global potato-infecting virus and type member of the Potexvirus genus.

Authors:  Jeanmarie Verchot
Journal:  Mol Plant Pathol       Date:  2021-11-17       Impact factor: 5.663

5.  Silencing P25, HC-Pro and Brp1 of Potato Virus (Viroid) Using Artificial microRNA Confers Resistance to PVX, PVY and PSTVd in Transgenic Potato.

Authors:  Lili Jiang; Rui Mu; Ziquan Wang; Shangwu Liu; Dianqiu Lu
Journal:  Potato Res       Date:  2022-08-18       Impact factor: 2.561

Review 6.  Application of Plant Viruses in Biotechnology, Medicine, and Human Health.

Authors:  Srividhya Venkataraman; Kathleen Hefferon
Journal:  Viruses       Date:  2021-08-26       Impact factor: 5.048

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.