Literature DB >> 20215467

Developmental timing of DNA elimination following allopolyploidization in wheat.

Vadim Khasdan1, Beery Yaakov, Zina Kraitshtein, Khalil Kashkush.   

Abstract

The elimination of DNA sequences following allopolyploidization is a well-known phenomenon. Yet, nothing is known about the biological significance, the mechanism, or the precise developmental timing of this event. In this study, we have observed reproducible elimination of an Aegilops tauschii allele in the genome of the second generation (S2) of a newly synthesized allohexaploid derived from a cross between Triticum turgidum and Ae. tauschii. We show that elimination of the Ae. tauschii allele did not occur in germ cells but instead occurred during S2 embryo development. This work shows that deletion of DNA sequences following allopolyploidization might occur also in a tissue-specific manner.

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Year:  2010        PMID: 20215467      PMCID: PMC2870972          DOI: 10.1534/genetics.110.116178

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  19 in total

1.  The role of genetic and genomic attributes in the success of polyploids.

Authors:  P S Soltis; D E Soltis
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

2.  Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat.

Authors:  H Shaked; K Kashkush; H Ozkan; M Feldman; A A Levy
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

Review 3.  Yesterday's polyploids and the mystery of diploidization.

Authors:  K H Wolfe
Journal:  Nat Rev Genet       Date:  2001-05       Impact factor: 53.242

Review 4.  Understanding mechanisms of novel gene expression in polyploids.

Authors:  Thomas C Osborn; J Chris Pires; James A Birchler; Donald L Auger; Z Jeffery Chen; Hyeon-Se Lee; Luca Comai; Andreas Madlung; R W Doerge; Vincent Colot; Robert A Martienssen
Journal:  Trends Genet       Date:  2003-03       Impact factor: 11.639

Review 5.  Allopolyploidy--a shaping force in the evolution of wheat genomes.

Authors:  M Feldman; A A Levy
Journal:  Cytogenet Genome Res       Date:  2005       Impact factor: 1.636

Review 6.  Novel patterns of gene expression in polyploid plants.

Authors:  Keith L Adams; Jonathan F Wendel
Journal:  Trends Genet       Date:  2005-10       Impact factor: 11.639

Review 7.  Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids.

Authors:  Z Jeffrey Chen
Journal:  Annu Rev Plant Biol       Date:  2007       Impact factor: 26.379

8.  Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes.

Authors:  M Feldman; B Liu; G Segal; S Abbo; A A Levy; J M Vega
Journal:  Genetics       Date:  1997-11       Impact factor: 4.562

9.  Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops-Triticum) group.

Authors:  H Ozkan; A A Levy; M Feldman
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

10.  Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype.

Authors:  Robert T Gaeta; J Chris Pires; Federico Iniguez-Luy; Enrique Leon; Thomas C Osborn
Journal:  Plant Cell       Date:  2007-11-16       Impact factor: 11.277

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  9 in total

1.  Mobilization of Stowaway-like MITEs in newly formed allohexaploid wheat species.

Authors:  Beery Yaakov; Khalil Kashkush
Journal:  Plant Mol Biol       Date:  2012-08-30       Impact factor: 4.076

2.  Genome-wide analysis of Stowaway-like MITEs in wheat reveals high sequence conservation, gene association, and genomic diversification.

Authors:  Beery Yaakov; Smadar Ben-David; Khalil Kashkush
Journal:  Plant Physiol       Date:  2012-10-26       Impact factor: 8.340

3.  Methylation, transcription, and rearrangements of transposable elements in synthetic allopolyploids.

Authors:  Beery Yaakov; Khalil Kashkush
Journal:  Int J Plant Genomics       Date:  2011-05-15

4.  Mitotic illegitimate recombination is a mechanism for novel changes in high-molecular-weight glutenin subunits in wheat-rye hybrids.

Authors:  Zhongwei Yuan; Dengcai Liu; Lianquan Zhang; Li Zhang; Wenjie Chen; Zehong Yan; Youliang Zheng; Huaigang Zhang; Yang Yen
Journal:  PLoS One       Date:  2011-08-22       Impact factor: 3.240

5.  Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum.

Authors:  Simon Renny-Byfield; Ales Kovařík; Michael Chester; Richard A Nichols; Jiri Macas; Petr Novák; Andrew R Leitch
Journal:  PLoS One       Date:  2012-05-14       Impact factor: 3.240

6.  Immediate Genetic and Epigenetic Changes in F1 Hybrids Parented by Species with Divergent Genomes in the Rice Genus (Oryza).

Authors:  Ying Wu; Yue Sun; Kun Shen; Shuai Sun; Jie Wang; Tingting Jiang; Shuai Cao; Samuel Manthi Josiah; Jinsong Pang; Xiuyun Lin; Bao Liu
Journal:  PLoS One       Date:  2015-07-24       Impact factor: 3.240

7.  Composition and random elimination of paternal chromosomes in a large population of wheat × barley (Triticum aestivum L. × Hordeum vulgare L.) hybrids.

Authors:  Dávid Polgári; Edit Mihók; László Sági
Journal:  Plant Cell Rep       Date:  2019-04-06       Impact factor: 4.570

8.  Gene Expression Changes During the Allo-/Deallopolyploidization Process of Brassica napus.

Authors:  Qi Pan; Bin Zhu; Dawei Zhang; Chaobo Tong; Xianhong Ge; Shengyi Liu; Zaiyun Li
Journal:  Front Genet       Date:  2019-12-19       Impact factor: 4.599

9.  Microsatellite mutation rate during allohexaploidization of newly resynthesized wheat.

Authors:  Jiangtao Luo; Ming Hao; Li Zhang; Jixiang Chen; Lianquan Zhang; Zhongwei Yuan; Zehong Yan; Youliang Zheng; Huaigang Zhang; Yang Yen; Dengcai Liu
Journal:  Int J Mol Sci       Date:  2012-10-01       Impact factor: 5.923

  9 in total

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