Literature DB >> 20215463

Predicting organic hydrogen atom transfer rate constants using the Marcus cross relation.

Jeffrey J Warren1, James M Mayer.   

Abstract

Chemical reactions that involve net hydrogen atom transfer (HAT) are ubiquitous in chemistry and biology, from the action of antioxidants to industrial and metalloenzyme catalysis. This report develops and validates a procedure to predict rate constants for HAT reactions of oxyl radicals (RO(*)) in various media. Our procedure uses the Marcus cross relation (CR) and includes adjustments for solvent hydrogen-bonding effects on both the kinetics and thermodynamics of the reactions. Kinetic solvent effects (KSEs) are included by using Ingold's model, and thermodynamic solvent effects are accounted for by using an empirical model developed by Abraham. These adjustments are shown to be critical to the success of our combined model, referred to as the CR/KSE model. As an initial test of the CR/KSE model we measured self-exchange and cross rate constants in different solvents for reactions of the 2,4,6-tri-tert-butylphenoxyl radical and the hydroxylamine 2,2'-6,6'-tetramethyl-piperidin-1-ol. Excellent agreement is observed between the calculated and directly determined cross rate constants. We then extend the model to over 30 known HAT reactions of oxyl radicals with OH or CH bonds, including biologically relevant reactions of ascorbate, peroxyl radicals, and alpha-tocopherol. The CR/KSE model shows remarkable predictive power, predicting rate constants to within a factor of 5 for almost all of the surveyed HAT reactions.

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Year:  2010        PMID: 20215463      PMCID: PMC2851756          DOI: 10.1073/pnas.0910347107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Application of the Marcus cross relation to hydrogen atom transfer reactions.

Authors:  J P Roth; J C Yoder; T J Won; J M Mayer
Journal:  Science       Date:  2001-12-21       Impact factor: 47.728

Review 2.  Proton-coupled electron transfer: a reaction chemist's view.

Authors:  James M Mayer
Journal:  Annu Rev Phys Chem       Date:  2004       Impact factor: 12.703

3.  Critical re-evaluation of the O-H bond dissociation enthalpy in phenol.

Authors:  Peter Mulder; Hans-Gert Korth; Derek A Pratt; Gino A DiLabio; Luca Valgimigli; G F Pedulli; K U Ingold
Journal:  J Phys Chem A       Date:  2005-03-24       Impact factor: 2.781

4.  Large ground-state entropy changes for hydrogen atom transfer reactions of iron complexes.

Authors:  Elizabeth A Mader; Ernest R Davidson; James M Mayer
Journal:  J Am Chem Soc       Date:  2007-04-03       Impact factor: 15.419

5.  NMR method for the determination of solute hydrogen bond acidity.

Authors:  Michael H Abraham; Raymond J Abraham; Jonathan Byrne; Lee Griffiths
Journal:  J Org Chem       Date:  2006-04-28       Impact factor: 4.354

6.  Solvent effects on the rates and mechanisms of reaction of phenols with free radicals.

Authors:  Grzegorz Litwinienko; K U Ingold
Journal:  Acc Chem Res       Date:  2007-03       Impact factor: 22.384

7.  Slow hydrogen atom transfer reactions of oxo- and hydroxo-vanadium compounds: the importance of intrinsic barriers.

Authors:  Christopher R Waidmann; Xin Zhou; Erin A Tsai; Werner Kaminsky; David A Hrovat; Weston Thatcher Borden; James M Mayer
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

8.  Trends in ground-state entropies for transition metal based hydrogen atom transfer reactions.

Authors:  Elizabeth A Mader; Virginia W Manner; Todd F Markle; Adam Wu; James A Franz; James M Mayer
Journal:  J Am Chem Soc       Date:  2009-04-01       Impact factor: 15.419

9.  Nitroxyl radical plus hydroxylamine pseudo self-exchange reactions: tunneling in hydrogen atom transfer.

Authors:  Adam Wu; Elizabeth A Mader; Ayan Datta; David A Hrovat; Weston Thatcher Borden; James M Mayer
Journal:  J Am Chem Soc       Date:  2009-08-26       Impact factor: 15.419

10.  Hydrogen atom transfer reactions of iron-porphyrin-imidazole complexes as models for histidine-ligated heme reactivity.

Authors:  Jeffrey J Warren; James M Mayer
Journal:  J Am Chem Soc       Date:  2008-02-08       Impact factor: 15.419

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  29 in total

Review 1.  Thermochemistry of proton-coupled electron transfer reagents and its implications.

Authors:  Jeffrey J Warren; Tristan A Tronic; James M Mayer
Journal:  Chem Rev       Date:  2010-10-06       Impact factor: 60.622

2.  O-H hydrogen bonding promotes H-atom transfer from α C-H bonds for C-alkylation of alcohols.

Authors:  Jenna L Jeffrey; Jack A Terrett; David W C MacMillan
Journal:  Science       Date:  2015-08-27       Impact factor: 47.728

3.  Understanding hydrogen atom transfer: from bond strengths to Marcus theory.

Authors:  James M Mayer
Journal:  Acc Chem Res       Date:  2010-10-26       Impact factor: 22.384

4.  Sterically directed nitronate complexes of 2,6-di-tert-butyl-4-nitrophenoxide with Cu(ii) and Zn(ii) and their H-atom transfer reactivity.

Authors:  Thomas R Porter; Ellen C Hayes; Werner Kaminsky; James M Mayer
Journal:  Dalton Trans       Date:  2017-02-21       Impact factor: 4.390

5.  A Simple Marcus-Theory Type Model for Hydrogen Atom Transfer/Proton-Coupled Electron Transfer.

Authors:  James M Mayer
Journal:  J Phys Chem Lett       Date:  2011       Impact factor: 6.475

6.  Impact of Intramolecular Hydrogen Bonding on the Reactivity of Cupric Superoxide Complexes with O-H and C-H Substrates.

Authors:  Daniel E Diaz; David A Quist; Austin E Herzog; Andrew W Schaefer; Ioannis Kipouros; Mayukh Bhadra; Edward I Solomon; Kenneth D Karlin
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-23       Impact factor: 15.336

Review 7.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

8.  Ligand Identity-Induced Generation of Enhanced Oxidative Hydrogen Atom Transfer Reactivity for a CuII2(O2•-) Complex Driven by Formation of a CuII2(-OOH) Compound with a Strong O-H Bond.

Authors:  David A Quist; Melanie A Ehudin; Andrew W Schaefer; Gregory L Schneider; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2019-07-30       Impact factor: 15.419

Review 9.  Redox properties of tyrosine and related molecules.

Authors:  Jeffrey J Warren; Jay R Winkler; Harry B Gray
Journal:  FEBS Lett       Date:  2011-12-26       Impact factor: 4.124

10.  The Third Dimension of a More O'Ferrall-Jencks Diagram for Hydrogen Atom Transfer in the Isoelectronic Hydrogen Exchange Reactions of (PhX)(2)H(•) with X = O, NH, and CH(2).

Authors:  Alessandro Cembran; Makenzie R Provorse; Changwei Wang; Wei Wu; Jiali Gao
Journal:  J Chem Theory Comput       Date:  2012-09-04       Impact factor: 6.006

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