Literature DB >> 20210710

Fragmentomics of natural peptide structures.

A A Zamyatnin1.   

Abstract

Natural fragmentation of peptide and other chemical structures is well known. They are a significant object of biochemical investigations. In this connection, the bases and determination are given for the notion of the "fragmentome" as a set of all fragments of a single substance, as well as for global fragmentome of all chemical components of living organisms. It is described how protein-peptide fragments are formed in nature, what experimental and theoretical methods are used for their investigation, as well as mathematical characteristics of fragmentomes. Individual fragmentomes of all subunits and of complete casein fragmentome are considered in detail. Structural and functional variety of its possible fragments was revealed by computer analysis. Formation in an organism of an exogenous-endogenous pool of oligopeptides and correlation of these data with concepts of structure-functional continuum of regulatory molecules is shown on an example of food protein fragments. Possible practical importance of the use of natural fragments in dietology, therapy, as well as in sanitary hygiene and cosmetics is noted.

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Year:  2009        PMID: 20210710     DOI: 10.1134/s0006297909130100

Source DB:  PubMed          Journal:  Biochemistry (Mosc)        ISSN: 0006-2979            Impact factor:   2.487


  4 in total

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Authors:  Hirofumi Uto; Shuji Kanmura; Yoichiro Takami; Hirohito Tsubouchi
Journal:  Proteome Sci       Date:  2010-12-31       Impact factor: 2.480

2.  BIOPEP-UWM Database of Bioactive Peptides: Current Opportunities.

Authors:  Piotr Minkiewicz; Anna Iwaniak; Małgorzata Darewicz
Journal:  Int J Mol Sci       Date:  2019-11-27       Impact factor: 5.923

3.  Alternative Proteins as a Source of Bioactive Peptides: The Edible Snail and Generation of Hydrolysates Containing Peptides with Bioactive Potential for Use as Functional Foods.

Authors:  Maria Hayes; Leticia Mora
Journal:  Foods       Date:  2021-01-30

4.  Plasma DNA Profile Associated with DNASE1L3 Gene Mutations: Clinical Observations, Relationships to Nuclease Substrate Preference, and In Vivo Correction.

Authors:  Rebecca W Y Chan; Lee Serpas; Meng Ni; Stefano Volpi; Linda T Hiraki; Lai-Shan Tam; Ali Rashidfarrokhi; Priscilla C H Wong; Lydia H P Tam; Yueyang Wang; Peiyong Jiang; Alice S H Cheng; Wenlei Peng; Diana S C Han; Patty P P Tse; Pik Ki Lau; Wing-Shan Lee; Alberto Magnasco; Elisa Buti; Vanja Sisirak; Nora AlMutairi; K C Allen Chan; Rossa W K Chiu; Boris Reizis; Y M Dennis Lo
Journal:  Am J Hum Genet       Date:  2020-10-05       Impact factor: 11.025

  4 in total

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