Literature DB >> 20208168

Crystallization and preliminary X-ray crystallographic studies of an exo-beta-D-glucosaminidase from Trichoderma reesei.

Yasumitsu Sakamoto1, Masakazu Ike, Nobutada Tanaka, Yoshiyuki Suzuki, Wataru Ogasawara, Hirofumi Okada, Takamasa Nonaka, Yasushi Morikawa, Kazuo T Nakamura.   

Abstract

Chitosan is degraded to glucosamine (GlcN) by chitosanase and exo-beta-D-glucosaminidase (GlcNase). GlcNase from Trichoderma reesei (Gls93) is a 93 kDa extracellular protein composed of 892 amino acids. The enzyme liberates GlcN from the nonreducing end of the chitosan chain in an exo-type manner and belongs to glycoside hydrolase family 2. For crystallographic investigations, Gls93 was overexpressed in Pichia pastoris cells. The recombinant Gls93 had two molecular forms of approximately 105 kDa (Gls93-F1) and approximately 100 kDa (Gls93-F2), with the difference between them being caused by N-glycosylation. Both forms were crystallized by the hanging-drop vapour-diffusion method. Crystals of Gls93-F1 belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 98.27, b = 98.42, c = 108.28 A, and diffracted to 1.8 A resolution. Crystals of Gls93-F2 belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 67.84, b = 81.62, c = 183.14 A, and diffracted to 2.4 A resolution. Both crystal forms were suitable for X-ray structure analysis at high resolution.

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Year:  2010        PMID: 20208168      PMCID: PMC2833044          DOI: 10.1107/S1744309110000606

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

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Authors:  Masakazu Ike; Koji Isami; Yoshio Tanabe; Masahiro Nogawa; Wataru Ogasawara; Hirofumi Okada; Yasushi Morikawa
Journal:  Appl Microbiol Biotechnol       Date:  2006-04-25       Impact factor: 4.813

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Authors:  V S Lamzin; K S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1993-01-01

4.  Purification and Characterization of Exo-beta-d-Glucosaminidase from a Cellulolytic Fungus, Trichoderma reesei PC-3-7.

Authors:  M Nogawa; H Takahashi; A Kashiwagi; K Ohshima; H Okada; Y Morikawa
Journal:  Appl Environ Microbiol       Date:  1998-03       Impact factor: 4.792

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  A structural view of the action of Escherichia coli (lacZ) beta-galactosidase.

Authors:  D H Juers; T D Heightman; A Vasella; J D McCarter; L Mackenzie; S G Withers; B W Matthews
Journal:  Biochemistry       Date:  2001-12-11       Impact factor: 3.162

7.  The structural basis of substrate recognition in an exo-beta-D-glucosaminidase involved in chitosan hydrolysis.

Authors:  Alicia Lammerts van Bueren; Mariana G Ghinet; Katie Gregg; Alain Fleury; Ryszard Brzezinski; Alisdair B Boraston
Journal:  J Mol Biol       Date:  2008-10-19       Impact factor: 5.469

8.  Three-dimensional structure of beta-galactosidase from E. coli.

Authors:  R H Jacobson; X J Zhang; R F DuBose; B W Matthews
Journal:  Nature       Date:  1994-06-30       Impact factor: 49.962

9.  Mannose foraging by Bacteroides thetaiotaomicron: structure and specificity of the beta-mannosidase, BtMan2A.

Authors:  Louise E Tailford; Victoria A Money; Nicola L Smith; Claire Dumon; Gideon J Davies; Harry J Gilbert
Journal:  J Biol Chem       Date:  2007-02-07       Impact factor: 5.157

10.  MrBUMP: an automated pipeline for molecular replacement.

Authors:  Ronan M Keegan; Martyn D Winn
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
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