Literature DB >> 20208166

Crystallization and preliminary X-ray studies of ferredoxin-NADP+ oxidoreductase encoded by Bacillus subtilis yumC.

Hirofumi Komori1, Daisuke Seo, Takeshi Sakurai, Yoshiki Higuchi.   

Abstract

Ferredoxin-NADP(+) oxidoreductase encoded by Bacillus subtilis yumC has been purified and successfully crystallized in complex with NADP(+) in two forms. Diffraction data from crystals of these two forms were collected at resolutions of 1.8 and 1.9 A. The former belonged to space group P2(1)2(1)2, with unit-cell parameters a = 63.90, b = 135.72, c = 39.19 A, and the latter to space group C2, with unit-cell parameters a = 207.47, b = 64.85, c = 61.12 A, beta = 105.82 degrees. The initial structure was determined by the molecular-replacement method using a thioredoxin reductase-like protein as a search model.

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Year:  2010        PMID: 20208166      PMCID: PMC2833042          DOI: 10.1107/S1744309110000151

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

Review 1.  Functional plasticity and catalytic efficiency in plant and bacterial ferredoxin-NADP(H) reductases.

Authors:  Eduardo A Ceccarelli; Adrián K Arakaki; Néstor Cortez; Néstor Carrillo
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2.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

Review 3.  Ferredoxin-dependent chloroplast enzymes.

Authors:  D B Knaff; M Hirasawa
Journal:  Biochim Biophys Acta       Date:  1991-01-22

4.  Solvent content of protein crystals.

Authors:  B W Matthews
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5.  Purification and characterization of ferredoxin-NAD(P)(+) reductase from the green sulfur bacterium Chlorobium tepidum.

Authors:  Daisuke Seo; Hidehiro Sakurai
Journal:  Biochim Biophys Acta       Date:  2002-05-20

6.  A novel electron transport system for thermostable CYP175A1 from Thermus thermophilus HB27.

Authors:  Takao Mandai; Shinsuke Fujiwara; Susumu Imaoka
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Review 7.  Structural and functional diversity of ferredoxin-NADP(+) reductases.

Authors:  Alessandro Aliverti; Vittorio Pandini; Andrea Pennati; Matteo de Rosa; Giuliana Zanetti
Journal:  Arch Biochem Biophys       Date:  2008-02-16       Impact factor: 4.013

8.  Crystal structure of Escherichia coli thioredoxin reductase refined at 2 A resolution. Implications for a large conformational change during catalysis.

Authors:  G Waksman; T S Krishna; C H Williams; J Kuriyan
Journal:  J Mol Biol       Date:  1994-02-25       Impact factor: 5.469

9.  Studies of interaction of homo-dimeric ferredoxin-NAD(P)+ oxidoreductases of Bacillus subtilis and Rhodopseudomonas palustris, that are closely related to thioredoxin reductases in amino acid sequence, with ferredoxins and pyridine nucleotide coenzymes.

Authors:  Daisuke Seo; Seisuke Okabe; Mitsuhiro Yanase; Kunishige Kataoka; Takeshi Sakurai
Journal:  Biochim Biophys Acta       Date:  2008-12-30

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  3 in total

1.  Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity.

Authors:  Hirofumi Komori; Daisuke Seo; Takeshi Sakurai; Yoshiki Higuchi
Journal:  Protein Sci       Date:  2010-11-03       Impact factor: 6.725

2.  S-bacillithiolation protects conserved and essential proteins against hypochlorite stress in firmicutes bacteria.

Authors:  Bui Khanh Chi; Alexandra A Roberts; Tran Thi Thanh Huyen; Katrin Bäsell; Dörte Becher; Dirk Albrecht; Chris J Hamilton; Haike Antelmann
Journal:  Antioxid Redox Signal       Date:  2012-10-18       Impact factor: 8.401

3.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of a ferredoxin/flavodoxin-NADP(H) oxidoreductase (Bc0385) from Bacillus cereus.

Authors:  Silje Skråmo; Hans Petter Hersleth; Marta Hammerstad; K Kristoffer Andersson; Åsmund K Røhr
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-10       Impact factor: 1.056

  3 in total

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