Literature DB >> 20202812

Recent advances in single-molecule sequencing.

Regina Treffer1, Volker Deckert.   

Abstract

Recent advances in sequencing technologies exhibit a tendency towards single-molecule sequencing, which eventually will lead to the commercial implementation of such platforms. For this purpose dye labelling is currently the foundation of most approaches and an overview is provided on the latest developments. For label-free sequencing the detection of conductivity changes using nanopores or nano-edges will be discussed as well as another promising method that is based on Raman spectroscopy. Here the most recent advance aims to utilize the high lateral resolution of tip-enhanced Raman scattering. For this sequencing procedure Raman spectra must be collected along the DNA or RNA strand, while the difference spectra will provide a direct sequence reading without prior labelling.

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Year:  2010        PMID: 20202812     DOI: 10.1016/j.copbio.2010.02.009

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  14 in total

1.  Single-molecule mechanical identification and sequencing.

Authors:  Fangyuan Ding; Maria Manosas; Michelle M Spiering; Stephen J Benkovic; David Bensimon; Jean-François Allemand; Vincent Croquette
Journal:  Nat Methods       Date:  2012-03-11       Impact factor: 28.547

2.  Infrared and Raman chemical imaging and spectroscopy at the nanoscale.

Authors:  Dmitry Kurouski; Alexandre Dazzi; Renato Zenobi; Andrea Centrone
Journal:  Chem Soc Rev       Date:  2020-05-19       Impact factor: 54.564

Review 3.  Potential role of atomic force microscopy in systems biology.

Authors:  Srinivasan Ramachandran; Fernando Teran Arce; Ratnesh Lal
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2011-07-15

Review 4.  The impact of next-generation sequencing on genomics.

Authors:  Jun Zhang; Rod Chiodini; Ahmed Badr; Genfa Zhang
Journal:  J Genet Genomics       Date:  2011-03-15       Impact factor: 4.275

5.  Amide I vibrational mode suppression in surface (SERS) and tip (TERS) enhanced Raman spectra of protein specimens.

Authors:  Dmitry Kurouski; Thomas Postiglione; Tanja Deckert-Gaudig; Volker Deckert; Igor K Lednev
Journal:  Analyst       Date:  2013-03-21       Impact factor: 4.616

Review 6.  Development and applications of single-cell transcriptome analysis.

Authors:  Fuchou Tang; Kaiqin Lao; M Azim Surani
Journal:  Nat Methods       Date:  2011-04       Impact factor: 28.547

Review 7.  Human genetics and genomics a decade after the release of the draft sequence of the human genome.

Authors:  Nasheen Naidoo; Yudi Pawitan; Richie Soong; David N Cooper; Chee-Seng Ku
Journal:  Hum Genomics       Date:  2011-10       Impact factor: 4.639

Review 8.  The properties and applications of single-molecule DNA sequencing.

Authors:  John F Thompson; Patrice M Milos
Journal:  Genome Biol       Date:  2011-02-24       Impact factor: 13.583

9.  Distinction of nucleobases - a tip-enhanced Raman approach.

Authors:  Regina Treffer; Xiumei Lin; Elena Bailo; Tanja Deckert-Gaudig; Volker Deckert
Journal:  Beilstein J Nanotechnol       Date:  2011-09-23       Impact factor: 3.649

10.  Mapping of single-base differences between two DNA strands in a single molecule using holliday junction nanomechanics.

Authors:  Camille Brème; François Heslot
Journal:  PLoS One       Date:  2013-02-05       Impact factor: 3.240

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