Literature DB >> 20196188

Pressure-assisted tryptic digestion using a syringe.

Hyo-Jik Yang1, Jangmi Hong, Sunyoung Lee, Seongjae Shin, Jinhee Kim, Jeongkwon Kim.   

Abstract

A simple and effective digestion method was developed using a syringe. A 3 mL syringe was used to apply a pressure of 6 atm to expedite tryptic digestion. Application of a pressure of 6 atm during digestion resulted in better digestion efficiency than digestion under atmospheric pressure. The protein peaks in the matrix-assisted laser desorption/ionization mass spectra of three model proteins (cytochrome c, horse heart myoglobin, and bovine serum albumin (BSA)) completely disappeared within 30 min at 37 degrees C under a pressure of 6 atm, with greater numbers of peptides observed in 30 min pressure-assisted digestion than in overnight atmospheric pressure digestion. This is mostly due to the miscleaved peptides. Similar sequence coverages were obtained for 30 min pressure-assisted digestion and overnight atmospheric pressure digestion of the three model proteins (92% vs. 88% for cytochrome c, 100% vs. 97% for horse heart myoglobin, and 53% vs. 53% for BSA). 2010 John Wiley & Sons, Ltd.

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Year:  2010        PMID: 20196188     DOI: 10.1002/rcm.4467

Source DB:  PubMed          Journal:  Rapid Commun Mass Spectrom        ISSN: 0951-4198            Impact factor:   2.419


  2 in total

1.  Pressurized pepsin digestion in proteomics: an automatable alternative to trypsin for integrated top-down bottom-up proteomics.

Authors:  Daniel López-Ferrer; Konstantinos Petritis; Errol W Robinson; Kim K Hixson; Zhixin Tian; Jung Hwa Lee; Sang-Won Lee; Nikola Tolić; Karl K Weitz; Mikhail E Belov; Richard D Smith; Ljiljana Pasa-Tolić
Journal:  Mol Cell Proteomics       Date:  2010-07-12       Impact factor: 5.911

2.  Rapid and efficient protein digestion using trypsin-coated magnetic nanoparticles under pressure cycles.

Authors:  Byoungsoo Lee; Daniel Lopez-Ferrer; Byoung Chan Kim; Hyon Bin Na; Yong Il Park; Karl K Weitz; Marvin G Warner; Taeghwan Hyeon; Sang-Won Lee; Richard D Smith; Jungbae Kim
Journal:  Proteomics       Date:  2010-12-17       Impact factor: 3.984

  2 in total

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